Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1210 ATGGCCACAGAAAACCCCAAATCCAGCGATTGGAGGACCGGCAATGAAGAAGCCTTCATCTCCTTGGGAAGCGAATACTCCGATCTTCAACAATCCTTTTTCCGCGACCGATTTCATGAACTTTACCCTCCAGAGTTCTCCAGAAAGCTTGTGGCGGAAGTGATTGCGACTTATTTGCTTGTGTTTGTGACGTGCGGAGCGGCAGCATTGAGTGCCAGTGATGAGCGGCAAGTGTCGAAGCTTGCTGCGTCGATTGCCGGCGGCCTGATTGTGACGGTGATGATTTACGCCGTCGGACATATCTCCGGCGCACATATGAATCCTGCAGTTACTTTTGCTTTTGCTGCTGTTAGGCGATTTCCATGGAAACAGGTTCCACTATATGCAACAGCTCAACTAAGTGGAGCTACATCAGCAGCCTTTACATTGCGCATACTATTGGACCCAATTAGAGAAGTAGGTACTACTACCCCTTGTGGACCAGAACTAAAAGCACTTCTCATGGAGATTGTTGTCTCATTCTGTATGATGTTTGTCACTTCTGCCGTGGCCACCGACACCAAAGCGATTGGAGAGCTTGCAGGTATAGCGGTGGGTTCAGCTGTTTGTGTCACATCCATCTTTGCTGGGCCTATATCGGGTGGGTCGATGAACCCTGCGAGGTCGATAGGACCTGCGATTGCGAGTTCACATTATGAAGGAATTTGGGTGTACCTAGTCGGGCCAGTTATGGGAACATTGTTGGGGGCATGGTCATATAATTTCATACGAGCGAGTGAAAAACATGGACATCCACTTTCTCTACATTGA 810 48.77 MATENPKSSDWRTGNEEAFISLGSEYSDLQQSFFRDRFHELYPPEFSRKLVAEVIATYLLVFVTCGAAALSASDERQVSKLAASIAGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWKQVPLYATAQLSGATSAAFTLRILLDPIREVGTTTPCGPELKALLMEIVVSFCMMFVTSAVATDTKAIGELAGIAVGSAVCVTSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVMGTLLGAWSYNFIRASEKHGHPLSLH 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48389505 48393215 + Tan0009392.1 Tan07g1210 758741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1210 269 Gene3D Glycerol uptake facilitator protein. 24 264 IPR023271 -
Tan07g1210 269 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 PRINTS Major intrinsic protein family signature 236 256 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 PRINTS Major intrinsic protein family signature 48 67 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 PANTHER AQUAPORIN NIP2-1 42 260 IPR034294 -
Tan07g1210 269 Pfam Major intrinsic protein 44 253 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1210 269 SUPERFAMILY Aquaporin-like 38 259 IPR023271 -
Tan07g1210 269 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Tan07g1210 269 CDD MIP 48 256 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1210 Tan-Chr7:48389505 Tan10g0883 Tan-Chr10:7392038 1.30E-33 dispersed
Tan07g1205 Tan-Chr7:47124639 Tan07g1210 Tan-Chr7:48389505 3.10E-99 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1210 K09874 - csv:101205456 413.305