Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g1210 | ATGGCCACAGAAAACCCCAAATCCAGCGATTGGAGGACCGGCAATGAAGAAGCCTTCATCTCCTTGGGAAGCGAATACTCCGATCTTCAACAATCCTTTTTCCGCGACCGATTTCATGAACTTTACCCTCCAGAGTTCTCCAGAAAGCTTGTGGCGGAAGTGATTGCGACTTATTTGCTTGTGTTTGTGACGTGCGGAGCGGCAGCATTGAGTGCCAGTGATGAGCGGCAAGTGTCGAAGCTTGCTGCGTCGATTGCCGGCGGCCTGATTGTGACGGTGATGATTTACGCCGTCGGACATATCTCCGGCGCACATATGAATCCTGCAGTTACTTTTGCTTTTGCTGCTGTTAGGCGATTTCCATGGAAACAGGTTCCACTATATGCAACAGCTCAACTAAGTGGAGCTACATCAGCAGCCTTTACATTGCGCATACTATTGGACCCAATTAGAGAAGTAGGTACTACTACCCCTTGTGGACCAGAACTAAAAGCACTTCTCATGGAGATTGTTGTCTCATTCTGTATGATGTTTGTCACTTCTGCCGTGGCCACCGACACCAAAGCGATTGGAGAGCTTGCAGGTATAGCGGTGGGTTCAGCTGTTTGTGTCACATCCATCTTTGCTGGGCCTATATCGGGTGGGTCGATGAACCCTGCGAGGTCGATAGGACCTGCGATTGCGAGTTCACATTATGAAGGAATTTGGGTGTACCTAGTCGGGCCAGTTATGGGAACATTGTTGGGGGCATGGTCATATAATTTCATACGAGCGAGTGAAAAACATGGACATCCACTTTCTCTACATTGA | 810 | 48.77 | MATENPKSSDWRTGNEEAFISLGSEYSDLQQSFFRDRFHELYPPEFSRKLVAEVIATYLLVFVTCGAAALSASDERQVSKLAASIAGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWKQVPLYATAQLSGATSAAFTLRILLDPIREVGTTTPCGPELKALLMEIVVSFCMMFVTSAVATDTKAIGELAGIAVGSAVCVTSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVMGTLLGAWSYNFIRASEKHGHPLSLH | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 48389505 | 48393215 | + | Tan0009392.1 | Tan07g1210 | 758741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g1210 | 269 | Gene3D | Glycerol uptake facilitator protein. | 24 | 264 | IPR023271 | - | |
Tan07g1210 | 269 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | PRINTS | Major intrinsic protein family signature | 199 | 221 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | PRINTS | Major intrinsic protein family signature | 236 | 256 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | PRINTS | Major intrinsic protein family signature | 48 | 67 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | PRINTS | Major intrinsic protein family signature | 168 | 186 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | PANTHER | AQUAPORIN NIP2-1 | 42 | 260 | IPR034294 | - | |
Tan07g1210 | 269 | Pfam | Major intrinsic protein | 44 | 253 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1210 | 269 | SUPERFAMILY | Aquaporin-like | 38 | 259 | IPR023271 | - | |
Tan07g1210 | 269 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Tan07g1210 | 269 | CDD | MIP | 48 | 256 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g1210 | Tan-Chr7:48389505 | Tan10g0883 | Tan-Chr10:7392038 | 1.30E-33 | dispersed | |
Tan07g1205 | Tan-Chr7:47124639 | Tan07g1210 | Tan-Chr7:48389505 | 3.10E-99 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g1210 | K09874 | - | csv:101205456 | 413.305 |