Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g1256 | ATGGAGGCTCCAGCTTTGGTACTGAAGAACGAGGAGAATCTCAGAATATGTTGGACAGAAGGCCATACTCAGGCCATGAGACGTGTCAAGAGACGGAGGAGAGATCACTCCCCCGCCACCGCCGCCGATCAAACGAATAAGCAGCCATGTCTTCAGCAACAATCCGATCAAGCTCCGACCACTACCACAAAACGGAGTTCAAGATTTCGTGGCGTCAGCAGGCATAGATGGACGGGTCGATTCGAAGCTCATTTATGGGATAAGCTTTCTTGGAACATGACACAAAAGAAGAAGGGCAAGCAAGGAGCTTATGATGAAGAAGAATCAGCTGCAAGAGCATATGATTTAGCAGCACTCAAGTACTGGGGTGTAACAACCATTACTAACTTCCCAATAACAGAATATGAAAAGGAGATTGAGATCATGCAAACAATGACAAAGGAGGAGTATTTGGCCTCTTTGAGAAGGAAGAGCAGTGGATTCTCAAGAGGTGTATCAAAATATAGAGGAGTTGCAAGGCACCATCACAATGGTAGATGGGAAGCAAGAATTGGGAGAGTTTATGGGAACAAGTACCTCTATCTTGGAACTTACAGCACTCAAGAGGAAGCCGCTCGAGCTTATGATATGGCCGCCATTGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAGCAATTACATGGCCTGGCTAAAGCCTCCGCCGCCGCCCGCTGCCCCCAACGAAACCCATATGGCGTCGGACCCCCACAAAGAACTCTGCAACTCCATCTCCATTCCAGTAGAAGAAACTTCCCTCTTCAAAAACCATCACTACGACGTTGATTCCTTCCATTCCCTTCAAAAGCAAGAGCTTCTTGAAAGCTGCAGCGCCCCTCTAAACGGTTACGCTAAATCTTCTTCTCCATCAGCACTCGACCTCCTTTTTCGATCTTCATTTTTCAAGAAACTGGTTGAGACCAACTCGAATCTCTCTGTGGACGAGGCTGATAATGGAGAAGAGGCGAAGACTCGAGCACAGCTCAACAGTGTCTTTGATGAGTTTGGAGACGTCTTCTGTGATAGACTTGCAGATGTACCTGAAAGTGAGCTTCATTCGTTCTTTAATGGCACATTTCACCACTTCAAAACATCCTGA | 1143 | 46.98 | MEAPALVLKNEENLRICWTEGHTQAMRRVKRRRRDHSPATAADQTNKQPCLQQQSDQAPTTTTKRSSRFRGVSRHRWTGRFEAHLWDKLSWNMTQKKKGKQGAYDEEESAARAYDLAALKYWGVTTITNFPITEYEKEIEIMQTMTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVYGNKYLYLGTYSTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPAAPNETHMASDPHKELCNSISIPVEETSLFKNHHYDVDSFHSLQKQELLESCSAPLNGYAKSSSPSALDLLFRSSFFKKLVETNSNLSVDEADNGEEAKTRAQLNSVFDEFGDVFCDRLADVPESELHSFFNGTFHHFKTS | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 56439284 | 56442747 | - | Tan0022712.1 | Tan07g1256 | 758787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g1256 | 380 | SUPERFAMILY | DNA-binding domain | 67 | 132 | IPR016177 | GO:0003677(InterPro) | |
Tan07g1256 | 380 | PRINTS | Ethylene responsive element binding protein signature | 69 | 80 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | PRINTS | Ethylene responsive element binding protein signature | 207 | 227 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | CDD | AP2 | 166 | 227 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | CDD | AP2 | 67 | 133 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | SMART | rav1_2 | 68 | 137 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | SMART | rav1_2 | 167 | 231 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | MobiDBLite | consensus disorder prediction | 41 | 67 | - | - | |
Tan07g1256 | 380 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 48 | 243 | - | - | |
Tan07g1256 | 380 | ProSiteProfiles | AP2/ERF domain profile. | 167 | 225 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | Pfam | AP2 domain | 67 | 123 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | Pfam | AP2 domain | 166 | 217 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | MobiDBLite | consensus disorder prediction | 25 | 71 | - | - | |
Tan07g1256 | 380 | FunFam | AP2-like ethylene-responsive transcription factor | 166 | 227 | - | - | |
Tan07g1256 | 380 | ProSiteProfiles | AP2/ERF domain profile. | 68 | 131 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | Gene3D | AP2/ERF domain | 166 | 226 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | Gene3D | AP2/ERF domain | 67 | 133 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g1256 | 380 | SUPERFAMILY | DNA-binding domain | 166 | 227 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2821 | Tan-Chr1:57040634 | Tan07g1256 | Tan-Chr7:56439284 | 3.30E-90 | dispersed | |
Tan07g1256 | Tan-Chr7:56439284 | Tan09g1597 | Tan-Chr9:67738656 | 1.10E-78 | dispersed | |
Tan07g1256 | Tan-Chr7:56439284 | Tan08g1184 | Tan-Chr8:28966042 | 6.50E-66 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27958 | PF00847 | AP2 | 2.40E-09 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g1256 | - | - | - | 0.0 |