Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1291 ATGTTCGATTGTGGTGGATACAAGTCGCAGTACATCGGCGGTCACAAGGAGAAATTCGTGAGGTTGGATGAGTTGGATTCAAATTTTTCAATGTCCTCTGGATCAAGCAAGATGAAGAAATGCCGATTCAACCTAGAAGGCCTCCCACTGCCATTCATCAGCCGATCGAAGCCTCGAAACGCGTCCAAATCGTTCCGAAGGGGAGTCCAAAGGAGCTCCGATGGAATCAAAACCCTAGGCCGCTCGCTCCGATCCGGCGTGTCCAGAGTCATCTTCCCTGAGGATCTGAAAGTATCGGATCAGAAAATCTTCGATCCGCAGGACAAATCGCTCCTCTTCTGGAACAAGCTGTTCGTCCTGTGCTGTATCCTCGCCGTTTCCATCGATCCGCTCTTCTTCTACCTCCCTGTGTTCAACCACGCCTCTTACTGCCTCGGAATGGACACTCAGCTCGCCGTCACGACCACCACCGTCCGTACGGCCGTCGATCTGTTCTACTTGATTCGGATGGGGTTCCAGTTCCGAACGGCTTACATTGCGCCGTCGTCAAGGGTGTTTGGTCGCGGCGAGCTTGTGATCGATCCGGCAGAGATCGCCAGGCGGTATCTTCAGCGCTATTTCATCGCCGATTTTCTCGCTGTTCTTCCTCTTCCTCAGGTGGTTGTGTGGAGGTTTCTTCACAGGTCAAAAGGTTCAGAGGTGTTGGCAACAAAACAAGCATTGTTAAACATAGTATTTCTTCAGTATATTCCCAGATTTATTAGGTTTATACCTTTGAACATAGAGCTTAAGAAGACAGCAGGTGTTTTTGCTGAAAGTGCTTGGGCTGGTGCTGCTTACTATCTCCTCTTGTACATGCTTGCTAGTCATATAGCAGGAGCATTCTGGTACTTACTGGCAGTGGAGAGGAACGATGCATGTTGGCGACAAGCATGCAAAAGCAGTGGGAAATGCAACATAAACTTTTTGTACTGCGGAAATAAGCACATGTCGGGGTATAAAGAATGGAAAGTTATAAGTATTGATGTTCTCAAAAAGAAATGCACTGCTGTTGGAGATAATTTGCCTTTCAACTATGGCATTTACACTCAGGCCATTTCCTCTGGCATTGTTCAGTCCAGGACTTTCATCTCCAAATTCTGCTATTGCTTGTGGTGGGGCTTGCAAAATTTGAGTACACTTGGTCAGGGACTGCTCACCAGTACCTATCCTGGAGAGGTTATCTTTTCTATACTAATTGCAATTTCTGGGCTCCTCCTTTTTGCACTCTTGATTGGAAATATGCAAACGTACCTTCAATCTCTAACAGTCCGGCTTGAAGAGATGCGGATAAAGAGGCGAGACTCGGAGCAGTGGATGCACCATCGACTGCTTCCGCCGGACCTGAGAGAAAAAGTTAGGCGCTACGATCAGTACAAATGGCTTGAAACCAGAGGAGTTGACGAAGAAAGCTTGGTTCAAAGTTTGCCTAAAGATCTTAGGAGAGACATTAAACGCCATCTCTGTCTCAATTTGGTTAGAAGGGTGCCTTTGTTTGCGAACATGGACGAACGTCTTCTAGACGCGATATGCGAGAGGCTAAAGCCAACACTGTACACAGAGAACACATACATAGTCCGAGAAGGCGACCCAGTTGATGAAATGCTCTTCATCATCCGTGGCCGTCTCGAGAGCGTCACCACCGACGGCGGCCGGAGTGGGTTCTTCAACCGTGGCGTTTTGAAAGAAGGCGACTTCTGCGGCGAGGAGCTTTTGACATGGGCCCTCGACCCCAAGTCCGGTGCCAACCTCCCTTCCTCCACTCGTACCGTCCACGCCCTCACCGAGGTCGAGGCCTTCGCATTGGAGGCCGAGGAACTCAAGTTCGTCGCCAGCCAGTTCCGGCGGCTGCACAGCCGACAGGTCCAGCACACCTTCAGATTCTACTCGCAGCAGTGGCGGACGTGGGCTTCTTGTTTTATACAGGCGGCGTGGCGGCGGTACTTGAAGCGGAAGATAGCGGAGTTGCGGCGGAAGGAGGAGGAGGAGGAGGAGGAGGCGGCAGCTGCAGCGGCGTATAACTCGTCGAGGCTTGGGGCGACGATTTTAGCATCGAGATTTGCGGCGAATGCTCTAAGAGGGCATCGGATGAGGAATTTGAGTGGGAGGAGCTTGCTTAGCTTGCAGAAGCCGGCGGAGCCTGATTTTTCTGTGTATAAAGGAGACTAA 2208 50.5 MFDCGGYKSQYIGGHKEKFVRLDELDSNFSMSSGSSKMKKCRFNLEGLPLPFISRSKPRNASKSFRRGVQRSSDGIKTLGRSLRSGVSRVIFPEDLKVSDQKIFDPQDKSLLFWNKLFVLCCILAVSIDPLFFYLPVFNHASYCLGMDTQLAVTTTTVRTAVDLFYLIRMGFQFRTAYIAPSSRVFGRGELVIDPAEIARRYLQRYFIADFLAVLPLPQVVVWRFLHRSKGSEVLATKQALLNIVFLQYIPRFIRFIPLNIELKKTAGVFAESAWAGAAYYLLLYMLASHIAGAFWYLLAVERNDACWRQACKSSGKCNINFLYCGNKHMSGYKEWKVISIDVLKKKCTAVGDNLPFNYGIYTQAISSGIVQSRTFISKFCYCLWWGLQNLSTLGQGLLTSTYPGEVIFSILIAISGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPPDLREKVRRYDQYKWLETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKSGANLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEEEAAAAAAYNSSRLGATILASRFAANALRGHRMRNLSGRSLLSLQKPAEPDFSVYKGD 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 59875683 59882805 + Tan0005923.1 Tan07g1291 758822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1291 735 ProSiteProfiles IQ motif profile. 647 676 - -
Tan07g1291 735 SUPERFAMILY cAMP-binding domain-like 441 631 IPR018490 -
Tan07g1291 735 SMART cnmp_10 511 642 IPR000595 -
Tan07g1291 735 CDD CAP_ED 511 642 IPR000595 -
Tan07g1291 735 FunFam Cyclic nucleotide-gated ion channel 1 509 627 - -
Tan07g1291 735 Coils Coil 659 686 - -
Tan07g1291 735 FunFam Cyclic nucleotide-gated ion channel 1 438 502 - -
Tan07g1291 735 ProSiteProfiles cAMP/cGMP binding motif profile. 511 641 IPR000595 -
Tan07g1291 735 Pfam Ion transport protein 113 438 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1291 735 Gene3D Helix hairpin bin 438 502 - -
Tan07g1291 735 Gene3D Jelly Rolls 509 629 IPR014710 -
Tan07g1291 735 Gene3D - 115 436 - -
Tan07g1291 735 Pfam Cyclic nucleotide-binding domain 532 622 IPR000595 -
Tan07g1291 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 85 711 - -
Tan07g1291 735 SUPERFAMILY Voltage-gated potassium channels 106 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1291 Tan-Chr7:59875683 Tan08g0725 Tan-Chr8:7495317 1.80E-306 dispersed
Tan07g1291 Tan-Chr7:59875683 Tan05g0241 Tan-Chr5:1824058 8.00E-206 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1291 K05391 - csv:101221166 1352.81