Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1310 ATGGAGATTCTGAAGTTCTTCTTGATTCTTCTCTCGACGGCGTCGTTATTCTCCCTATTGGAATCGGCTCCTCTCACGGCGAATTACTACCAGAGATCCTGCCCGAGATTCAGCCAGATTATCCAAGAAACCATCACCAACAAGCAGATCACAAGCCCTTCCACCGCCGCCGGAACTCTCCGTCTCTTTCTCCACGACTGTCTCCCCAATGGCTGCGACGGCTCCGTCCTCATCTCCTCCACTCCCTTCAACAAAGCTGAGCGCGACGCCGACATCAACCTCTCTCTCCCAGGCGACGCCTTCGATGTCGTTGTTCGGGCCAAGACCGCTCTCGAGCTCGCATGTCCGAACACAGTCTCCTGTGCGGACATTCTCGCCGTTGCCACTCGCGACCTCGTCACCATGGTCGGCGGACCTTACTACAACGTTCTCCTCGGTCGCCGGGATGGCCGTGTGTCGAAAGCTTCGACGATTCCTGGTGCTCTGCCGATGGCTACATCGCCGATGTCTCAGATTATTGATATTTTCAAAGCTCGCGGGTTTACTGTGCAGGAAATGGTAGCGTTAAGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGTTCTCAGATCTATAATTATAGCAAGTCGTCTTCGTTTGACACTCAGTATAACGCTAGATTCGCGCAAGGGTTGCAGAAGGCTTGTTCTGGTTTTGAAAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAACAAATTTGATAACTCTTACTTCCAGAATCTTCCTAAGGGATTGGGGATCTTGAAGTCTGATCATGGATTGCTTAACGATTGGAGGACGAAACCGTTTGTGGAGGCGTATGCGGCGGATGAGAAAAAATTCTTCAGGGATTTTGCTCAGGCGATGGAGAAGTTGAGTAATTATAAAGTTATGACAGGGAATCAAGGGGAGATTCGGCATAGGTGTGATGCGATTAATTAA 981 49.34 MEILKFFLILLSTASLFSLLESAPLTANYYQRSCPRFSQIIQETITNKQITSPSTAAGTLRLFLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVVVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPMATSPMSQIIDIFKARGFTVQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSFDTQYNARFAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILKSDHGLLNDWRTKPFVEAYAADEKKFFRDFAQAMEKLSNYKVMTGNQGEIRHRCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 60975823 60979786 - Tan0009194.1 Tan07g1310 758841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1310 326 FunFam Peroxidase 163 305 - -
Tan07g1310 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan07g1310 326 FunFam Peroxidase 28 170 - -
Tan07g1310 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 Gene3D - 28 326 - -
Tan07g1310 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 Pfam Peroxidase 43 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tan07g1310 326 Gene3D Peroxidase, domain 2 163 305 - -
Tan07g1310 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1310 326 PANTHER - 9 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2038 Tan-Chr5:70579068 Tan07g1310 Tan-Chr7:60975823 1.40E-109 dispersed
Tan07g1310 Tan-Chr7:60975823 Tan11g0147 Tan-Chr11:1382984 1.80E-72 dispersed
Tan07g1310 Tan-Chr7:60975823 Tan07g1311 Tan-Chr7:60975823 1.40E-186 tandem
Tan01g2535 Tan-Chr1:35522325 Tan07g1310 Tan-Chr7:60975823 4.00E-16 transposed
Tan11g1263 Tan-Chr11:10767002 Tan07g1310 Tan-Chr7:60975823 6.50E-12 transposed
Tan11g0586 Tan-Chr11:5212357 Tan07g1310 Tan-Chr7:60975823 4.70E-73 wgd
Tan07g1310 Tan-Chr7:60975823 Tan09g2202 Tan-Chr9:72126561 2.80E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1310 K00430 - csv:101219829 603.208