Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1352 ATGAAAGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAACAGTTACAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGGAAGGAGGACGAGGAAGGCGGCGGTGGAGGTGGTGGTGGCCGAGTAGGCGGCGGCGGAAGGCCGGCGATCACCAGACAGGAGTGGGAGATTGACCCTTCTAAACTCATTATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGACGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCATCTCTTAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGGGCAACAATAGGCTCCTCAGATCTACAAATACAAACAGAAAATGGCCAAATTGGCATGCCAAGCAATATTTGTTGTGTCGTTGTTGAATATTGTCCTGGAGGTGCTTTAAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCACTAGATCTTGCAAGAGGGTTGAGCTATCTTCACTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTCGGTGTTGCTCGTGTGGAGGCCTCAAATCCCAACGATATGACTGGCGAGACCGGAACCCTGGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCAGAAGTGACTTCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGTTGGGACGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAACAATTGACACATCAAAGGGTGGAGGTATGATCCCCCTCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGGCCATGA 1140 47.11 MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKRKEDEEGGGGGGGGRVGGGGRPAITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLQIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLETIDTSKGGGMIPLDQSQGCFCFRRYRGP 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 63201828 63205902 - Tan0008403.1 Tan07g1352 758883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1352 379 MobiDBLite consensus disorder prediction 30 63 - -
Tan07g1352 379 Gene3D Phosphorylase Kinase; domain 1 63 160 - -
Tan07g1352 379 Pfam Protein tyrosine and serine/threonine kinase 78 350 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Tan07g1352 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 351 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Tan07g1352 379 Gene3D Transferase(Phosphotransferase) domain 1 176 366 - -
Tan07g1352 379 CDD STKc_MAP3K-like 82 350 - -
Tan07g1352 379 MobiDBLite consensus disorder prediction 30 49 - -
Tan07g1352 379 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 FunFam Serine/threonine-protein kinase HT1 176 361 - -
Tan07g1352 379 FunFam Kinase suppressor of Ras 1 65 160 - -
Tan07g1352 379 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1352 379 SMART serkin_6 76 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1352 Tan-Chr7:63201828 Tan10g0802 Tan-Chr10:6778818 3.60E-149 dispersed
Tan07g1352 Tan-Chr7:63201828 Tan09g2234 Tan-Chr9:72305500 5.40E-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67871 PF07714 PK_Tyr_Ser-Thr 1.80E-64 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1352 - - - 0.0