Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1359 ATGGCGGTTCTGCAGCTTCCTTGTGTGAGGACTATGGACGGTTCGTCTTCGCCATTGTTGAGAGGAAGTAAATCGTCGTTGTTTTGGGGAAGAGATTTGTGCTTTGCAAATGGAAGTATGAGGGATGGTCCGAGAGTGAAAGCTCGATTCAATGGTCGAGTTGGTAAGGTTTTCGCCATGTCGGATGGCTCGTCTTCTTCATTTAAGATGAATCTCAATGAGTATATGGTTACTCTTGAGAAACCGCTTGGTATTCGGTTCGCGATTTCTGTCGATGGAAGAATATTCGTTCACTCGCTTAAAAAAGGGGGTAATGCTGAGAAGTCGAGAATAATCATGGTGGGGGACACATTAAAGAAGGCAAGCGATTCATCTGGCGTCAAGCTCATTGAGGTCAAAGACTTTGGTGATACACAGATGATGCTGAAGGAGAAAGCAGGGTCTTTTAGCCTGGTTCTTGAAAGACCTTTCACTCCATTTCCGATTCAACAGCTTCTGCTTTCAAACGATTTAGATATTTTATTTAATCGAGGTCGAGTTCCTATTGCGACTTGGAAGAAAGAAGTTTTGGCATCTAATTTACAAACACGTGATGCAAACAGTGGGAATTCTGGCTTTGCGATTTTCTCCTCTAAGTTCTCAACACCACAAGGTTGGAAGCTTCTAAATGATCAAAGTGGAGAGGTTAAATCATCTATGCAGAAAAACATTCTCACGCCTCAAATCAGCCAGCTTGTTGGTATATTTTCTGAAGAGGAGCCTGGAGAAGGAGAATGGGCTCATGGGAGCTTCCCCTTAGATGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACAGAGCAAATTTATGTGGGGTCATGTTTACAGACTGAAGCAGACGTTGAGGCTTTGTCAAAAAATGTGGGAGTCACAACCGTACTGAATTTTCAAAGTTCAACTGAGGCAGAAAACTGGGGGATTAGTTCCAAGTTGATCAATGAGTCATGCCAAAAATTTGATATTCTTATGATCAACTATCCTATCAGGGAAGGAGATTCTTATGATTTGAGGAAAAAACTACCATTTTGTGTGGGCCTACTTCTACGACTGTTAAAAAAGAACCATCGAGTTTTTGTTACTTGTACCACTGGTTTTGATCGATCTCCAGCATGTGTAATTGCATATTTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCAGCAATTGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAAAATGGAAGGCATGATGGACCTCCCACTCATGCCGTTACCTTCGTATGGAATGGACAAGAGGGGGAAGATGTAAATTTGGTTGGAGATTTTACTGGTAACTGGAAAGAACCGGCCAAGGCTAGTCACAAGGGTGGGCCTAGATATGAAGTAGAAATGAAACTTCCTCAGGGGAAGTATTACTACAAGTACATCACAAATGGTCAGTGGAGGCACTCAACAACTTCACCTGCTGAAAGAGATAATAGGGGGAATGTCAACAATGTAATAGTCATCGGCGACACGGCCAATGTTAGGCCTTCAGTCCAACCACAAAAAAAAGATGCAAATATTGTGAAGGTAATTGAAAGACCACTGACAGAAAATGAGCGGTTTATGTTGGCGAAAGCGGCTCGTTGTGTTGCATTTTCTGTATGCCCAATTAGACTAACTCCCAAGTAG 1770 42.49 MAVLQLPCVRTMDGSSSPLLRGSKSSLFWGRDLCFANGSMRDGPRVKARFNGRVGKVFAMSDGSSSSFKMNLNEYMVTLEKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLIEVKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQQLLLSNDLDILFNRGRVPIATWKKEVLASNLQTRDANSGNSGFAIFSSKFSTPQGWKLLNDQSGEVKSSMQKNILTPQISQLVGIFSEEEPGEGEWAHGSFPLDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSKNVGVTTVLNFQSSTEAENWGISSKLINESCQKFDILMINYPIREGDSYDLRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRSPACVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPAKASHKGGPRYEVEMKLPQGKYYYKYITNGQWRHSTTSPAERDNRGNVNNVIVIGDTANVRPSVQPQKKDANIVKVIERPLTENERFMLAKAARCVAFSVCPIRLTPK 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 63577044 63586158 - Tan0007341.1 Tan07g1359 758890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1359 589 ProSiteProfiles Dual specificity protein phosphatase domain profile. 289 448 IPR020422 GO:0006470(InterPro)
Tan07g1359 589 Gene3D Immunoglobulins 443 539 IPR013783 -
Tan07g1359 589 SMART dsp_5 289 440 IPR020422 GO:0006470(InterPro)
Tan07g1359 589 Gene3D Protein tyrosine phosphatase superfamily 282 547 IPR029021 -
Tan07g1359 589 ProSiteProfiles PDZ domain profile. 76 157 IPR001478 GO:0005515(InterPro)
Tan07g1359 589 CDD DSP_laforin-like 288 434 IPR045204 GO:0019203(InterPro)
Tan07g1359 589 CDD E_set_AMPKbeta_like_N 456 535 - -
Tan07g1359 589 SUPERFAMILY E set domains 453 536 IPR014756 -
Tan07g1359 589 Pfam Glycogen recognition site of AMP-activated protein kinase 456 537 IPR032640 -
Tan07g1359 589 Pfam Dual specificity phosphatase, catalytic domain 306 421 IPR000340 GO:0016311(InterPro)
Tan07g1359 589 SUPERFAMILY PDZ domain-like 61 162 IPR036034 GO:0005515(InterPro)
Tan07g1359 589 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 281 427 IPR029021 -
Tan07g1359 589 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 57 583 - GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0043036(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1359 Tan-Chr7:63577044 Tan09g0977 Tan-Chr9:61858357 4.70E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1359 - - - 0.0