Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1380 ATGATTTCCATTTCCATCCATTTCTCAAACCAAATTCCAATCCATGGAGTTCCCTTCTTCTTCTTCGTCTTCCTCTTCTTCTCTGTTTCTCTCTCAGATCCACGAATCTCCGAATCCGGAAGCTTCTGCGGAACCTCTAAGGCTCCGCCCAGCTCCAGATTCATCCCAACCTTCATCGAAGAAATGGAAGGCATATCCGAGCTTCTCACCACTCGCAGTTGGACCACTCACTTCGTCAATTCCACTCCCCCAATGTTCGCCCTATCGCAATGCTTCAACGATCTCTCTCACACCGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCGCCCTCCCCCGCTGCCTCCCCGCCGTCGCCGCCCGGATCTTCCTCGACGGATGCTTCCTCCGCTACGACAATTACAGCTTCTACAAGGAGTCCACCGATTCGCTTAGGGATTCTGTGAATTGCACCTCGGAATTGGGGGAAGTCGGTGAATCTGAGAAGTTAGGGTTTGAGAAGAATGTTAGGGCTGTTGTTGAATCCGTGACGACGACGGCCATGGCGAAGGGCGGATTTGGGATTGGTGAAGTTAATGGACTGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCTGAAGGGTGCAGGGCTTGCTTGGAGAAGGCGAAGAGGAGTATTAGAATCTGCTCGCCGAGTAGAGAAGGGAGGGCTTTGAATACTGGGTGTTATTTGAGATATTCGACTCTGAAGTTCTATAATGATGAGGATGAAGAACGGGATCATGATGGATTTTCTGGAAGAAGAGCTGTAGTTGCCATTGTCTTAGCTTCAGCTGCTTCCTTAATCATTTCCTGTTCTGCTGTTTTTGCATGCTATACAAGAATATCGAAGTTCAAGAAAGAGAAGAAAAAACAATCCCTTATTCCAATTTCCTTTAAGGATTCCGATTTGAATTTCAAGTATGAAACGCTTGAAAAGGCAACAGATTACTTCAACCCATCAAATAAGATAGGCCAAGGTGGAGCTGGTTCTGTTTATAAAGGGACTCTTCCAAATGGGCAGATGGTTGCTGTGAAGAGATTGGTTTTCCATACAAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTGATCCGCGGAATCCAACACAAAAATCTTGTTTCCCTTTTAGGTTGCAGCATTGAAGGGCCTGAAAGCCTGCTGGTCTATGAGTATGTTCCGAACCAGAGCCTCGATCACTTCCTATTCGATAAGAACAAGGTTCAGATTCTAAATTGGAAGCAGCGTTTCAACATTATTGTGGGAACAGCTGAGGGGCTTACGCATCTTCATGAAGGTTGTAAAATAAGAATAATCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAAAATTTCAATCCAAAGATTGCGGATTTTGGCCTCGCTCGGCATTTTGCTGCGGATCAGACTCATCTTAGCACTGGAATTGCTGGGACACTAGGTTACATGGCACCTGAGTATCTCGTTCGAGGACAACTCACAGAAAAGGCAGATGTTTATAGCTTTGGAGTATTGATACTCGAGATCGTTTGCGGTAGAAGAAATAGTTCCTTCACAGAGAACTCTACTCCACTCCTCCAAACTGTTTGGGATCTATACAAATCAGAGAGATTAATTGAAGCCATTGACACATGCCTGAACAAGGATTACCCTGCAAAAGAAGCCATGGATGTTCTGCAAATAGGGCTCTTATGCACACAAGCTCTAGCTTCTTCGAGACCGTCAATGGCGACAATAGTGAAACTGCTAACCAGTGAAGGAGAAAGGAAGGTTGGCATTCCAGAACAACCTCCATTTCTGAATCCCTATGGACCCTCAAGAAAATCTTGCAGAATTAGCAGCTTGGTATCTCATGCAGTTTCCAAACTTGAAGTTCCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTAACTTGCCTTCAAGAAGTAGAGATTCTGCTGAACTGAATTCAAACTGA 1989 45.45 MISISIHFSNQIPIHGVPFFFFVFLFFSVSLSDPRISESGSFCGTSKAPPSSRFIPTFIEEMEGISELLTTRSWTTHFVNSTPPMFALSQCFNDLSHTDCLLCYAASRTALPRCLPAVAARIFLDGCFLRYDNYSFYKESTDSLRDSVNCTSELGEVGESEKLGFEKNVRAVVESVTTTAMAKGGFGIGEVNGLFGLAQCWGSVEPEGCRACLEKAKRSIRICSPSREGRALNTGCYLRYSTLKFYNDEDEERDHDGFSGRRAVVAIVLASAASLIISCSAVFACYTRISKFKKEKKKQSLIPISFKDSDLNFKYETLEKATDYFNPSNKIGQGGAGSVYKGTLPNGQMVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVSLLGCSIEGPESLLVYEYVPNQSLDHFLFDKNKVQILNWKQRFNIIVGTAEGLTHLHEGCKIRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLIEAIDTCLNKDYPAKEAMDVLQIGLLCTQALASSRPSMATIVKLLTSEGERKVGIPEQPPFLNPYGPSRKSCRISSLVSHAVSKLEVPSCTSTDSGSSSNLPSRSRDSAELNSN 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 64349159 64352533 + Tan0002216.1 Tan07g1380 758911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1380 662 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 175 621 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Tan07g1380 662 FunFam Cysteine-rich receptor-like protein kinase 2 401 601 - -
Tan07g1380 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1380 662 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Tan07g1380 662 FunFam Cysteine-rich receptor-like protein kinase 42 62 136 - -
Tan07g1380 662 FunFam Cysteine-rich receptor-like protein kinase 2 292 400 - -
Tan07g1380 662 SUPERFAMILY Protein kinase-like (PK-like) 301 593 IPR011009 -
Tan07g1380 662 ProSiteProfiles Gnk2-homologous domain profile. 145 245 IPR002902 -
Tan07g1380 662 SMART serkin_6 325 574 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1380 662 FunFam Cysteine-rich receptor-like protein kinase 3 147 245 - -
Tan07g1380 662 Gene3D - 39 136 IPR038408 -
Tan07g1380 662 Gene3D - 151 245 IPR038408 -
Tan07g1380 662 CDD STKc_IRAK 331 594 - -
Tan07g1380 662 ProSiteProfiles Gnk2-homologous domain profile. 36 136 IPR002902 -
Tan07g1380 662 Pfam Protein tyrosine and serine/threonine kinase 328 592 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1380 662 ProSiteProfiles Protein kinase domain profile. 325 610 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1380 662 MobiDBLite consensus disorder prediction 634 662 - -
Tan07g1380 662 Pfam Salt stress response/antifungal 160 242 IPR002902 -
Tan07g1380 662 Pfam Salt stress response/antifungal 75 134 IPR002902 -
Tan07g1380 662 Gene3D Transferase(Phosphotransferase) domain 1 401 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1380 Tan-Chr7:64349159 Tan05g3130 Tan-Chr5:83411324 4.90E-93 dispersed
Tan07g1380 Tan-Chr7:64349159 Tan04g1269 Tan-Chr4:12200508 8.40E-162 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67874 PF07714 PK_Tyr_Ser-Thr 3.10E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1380 - - - 0.0