Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan07g1392 | ATGTTGAAACAACAGCTTACAGAAAGGAGGGAAAGGGAAAAAAATTATTGGAAGATGTCTTCTTCCACCTACTCCAATTCTCCCTGTGCAGCCTGCAAGTTTCTACGGCGAAAATGCCTCCCGGATTGCGTTTTCGCCCCGTATTTCCCGCCGGAGGAGCCACAAAAGTTCGCCAACGTCCACAAGATCTTCGGCGCCAGCAATGTCAGCAAACTACTGAACGAAGTCCAACCGCACCAGCGGGAGGACGCCGTGAACTCGCTCGCCTATGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGCTGCGTTGGTGCCATCTCCATCCTCCAAAGGCAAGTCATCAAGCTCCAGAAAGAACTCGACGCCACCAACGCCGACCTCATTCGCTACGCCTGCAGTGAAATCCCCGCCCCGTCCTCGTCGTCACAATACGCTCGGAGGTCGTCGTCGACGAGTCACGAGGGAAGCTCATCTACCTCTAGCTATGGCCACTACTATACTGGGCTCTACTTTTCTCCATGGAGTAACAACAATGGTCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA | 579 | 53.02 | MLKQQLTERREREKNYWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNGPCGDGHDKGEYK | 192 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 64748048 | 64751020 | - | Tan0014288.1 | Tan07g1392 | 758923 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan07g1392 | 192 | MobiDBLite | consensus disorder prediction | 139 | 161 | - | - | |
| Tan07g1392 | 192 | Coils | Coil | 107 | 127 | - | - | |
| Tan07g1392 | 192 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 26 | 145 | - | - | |
| Tan07g1392 | 192 | ProSiteProfiles | LOB domain profile. | 27 | 128 | IPR004883 | - | |
| Tan07g1392 | 192 | Pfam | Lateral organ boundaries (LOB) domain | 28 | 125 | IPR004883 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g2752 | Tan-Chr3:80380605 | Tan07g1392 | Tan-Chr7:64748048 | 1.10E-23 | dispersed | |
| Tan05g1980 | Tan-Chr5:69437201 | Tan07g1392 | Tan-Chr7:64748048 | 8.10E-51 | dispersed | |
| Tan07g1392 | Tan-Chr7:64748048 | Tan11g0319 | Tan-Chr11:2505729 | 2.50E-34 | dispersed | |
| Tan08g0946 | Tan-Chr8:13911607 | Tan07g1392 | Tan-Chr7:64748048 | 2.50E-47 | transposed | |
| Tan11g0292 | Tan-Chr11:2308414 | Tan07g1392 | Tan-Chr7:64748048 | 1.00E-37 | transposed | |
| Tan07g1017 | Tan-Chr7:25342397 | Tan07g1392 | Tan-Chr7:64748048 | 8.10E-41 | transposed | |
| Tan11g0653 | Tan-Chr11:5740323 | Tan07g1392 | Tan-Chr7:64748048 | 7.50E-59 | wgd | |
| Tan07g1392 | Tan-Chr7:64748048 | Tan09g2289 | Tan-Chr9:72856130 | 4.00E-56 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 27971 | PF03195 | LOB | 3.00E-42 | No_clan | Tan | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan07g1392 | - | - | - | 0.0 |