Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1392 ATGTTGAAACAACAGCTTACAGAAAGGAGGGAAAGGGAAAAAAATTATTGGAAGATGTCTTCTTCCACCTACTCCAATTCTCCCTGTGCAGCCTGCAAGTTTCTACGGCGAAAATGCCTCCCGGATTGCGTTTTCGCCCCGTATTTCCCGCCGGAGGAGCCACAAAAGTTCGCCAACGTCCACAAGATCTTCGGCGCCAGCAATGTCAGCAAACTACTGAACGAAGTCCAACCGCACCAGCGGGAGGACGCCGTGAACTCGCTCGCCTATGAGGCCGAGGCGAGGATGAAAGACCCTGTCTATGGCTGCGTTGGTGCCATCTCCATCCTCCAAAGGCAAGTCATCAAGCTCCAGAAAGAACTCGACGCCACCAACGCCGACCTCATTCGCTACGCCTGCAGTGAAATCCCCGCCCCGTCCTCGTCGTCACAATACGCTCGGAGGTCGTCGTCGACGAGTCACGAGGGAAGCTCATCTACCTCTAGCTATGGCCACTACTATACTGGGCTCTACTTTTCTCCATGGAGTAACAACAATGGTCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA 579 53.02 MLKQQLTERREREKNYWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNGPCGDGHDKGEYK 192
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 64748048 64751020 - Tan0014288.1 Tan07g1392 758923
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1392 192 MobiDBLite consensus disorder prediction 139 161 - -
Tan07g1392 192 Coils Coil 107 127 - -
Tan07g1392 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 145 - -
Tan07g1392 192 ProSiteProfiles LOB domain profile. 27 128 IPR004883 -
Tan07g1392 192 Pfam Lateral organ boundaries (LOB) domain 28 125 IPR004883 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2752 Tan-Chr3:80380605 Tan07g1392 Tan-Chr7:64748048 1.10E-23 dispersed
Tan05g1980 Tan-Chr5:69437201 Tan07g1392 Tan-Chr7:64748048 8.10E-51 dispersed
Tan07g1392 Tan-Chr7:64748048 Tan11g0319 Tan-Chr11:2505729 2.50E-34 dispersed
Tan08g0946 Tan-Chr8:13911607 Tan07g1392 Tan-Chr7:64748048 2.50E-47 transposed
Tan11g0292 Tan-Chr11:2308414 Tan07g1392 Tan-Chr7:64748048 1.00E-37 transposed
Tan07g1017 Tan-Chr7:25342397 Tan07g1392 Tan-Chr7:64748048 8.10E-41 transposed
Tan11g0653 Tan-Chr11:5740323 Tan07g1392 Tan-Chr7:64748048 7.50E-59 wgd
Tan07g1392 Tan-Chr7:64748048 Tan09g2289 Tan-Chr9:72856130 4.00E-56 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27971 PF03195 LOB 3.00E-42 No_clan Tan TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1392 - - - 0.0