Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1394 ATGGCGGGTCTCGAGGAACTCAAGAAGAAACTTACTCCATTGTTTGATGCTGAAAAAGGGTTTTCTATGGATTCCCCTGTGAACCCTTCCGATTCCTATACGTTTTCAGACAATGGGACTGTTAATTTGCTGAGCCGATCATATGGAGTTTACAATTTTAATGAGCTAGGGTTACAAAAATGCACGTCTTGGCTTGCCGACGATTCGGGGAGTAGTGAGAGGACATATCGATGTGCTTCCCGTGAAATGAGGATATTTGGAGCCATTGGTAGTGGCGCTAGCAGTGTTGTTCAGAGAGCTATCCACATTCCTGCTCACCGAATCATGGCTTTGAAGAAGATTAATATCTTTGAAAAGGAGAAAAGACAGCAGCTTCTTACCGAGATAAGGACACTATGTGAAGCCCCCTGTTCCGAGGGTCTAGTGGAGTTTCATGGAGCATTTTATACCCCTGACTCTGGGCAAATAAGCATAGCTTTGGAATACATGGATGGAGGGTCATTGGCCGATGTCCTGCGTTTGAAAAAATGTATACCTGAGCCTGTTCTTTCGTCTATGTTTCAGAAACTTCTTCATGGTCTAAGTTATCTGCATGGAGTAAGACATTTGGTTCACAGAGACATAAAGCCAGCTAATTTACTTGTAAATCTAAAGGGGGAAGCAAAAATTACAGATTTTGGCATAAGTGCCGGCTTAGAGAATTCAATGGCAATGTGTGCTACTTTCGTCGGAACTGTCACATACATGTCACCAGAGCGAATTCGAAACGAGAGCTATTCTTATCCAGCTGACATTTGGAGCCTTGGGCTTGCACTATTTGAGTGTGGTACTGGCGAATTTCCATATTCAGCTACTGAAGGTCTAGTGAACCTTATGTTGCAGATTTTGGATGACCCATCTCCATCCCCATCAAAACAGAAGTTTTCGCCGGAGTTTTGCTCGTTTGTTGATGCCTGCTTGCAGAAAGATGCAGATGCTAGGCCAACAGCAGAGCAGCTTCTTTCACACCCATTTATCAAAAAATATGAGGATGAACAAGTAGACTTGGCAGCGTTTGTCCAAAATGTGTTTGATCCAATACAGAGGATGAAGGACTTGGCAGATATGTTGACAATTCATTATTACTTGCTTTTTGATGGACCTGATGAATTCTGGCACCATACAAAAGCTTTGTACAATGAAAGCTCTACTTTAAGTTTCTCAGGGAAGCAATTTTCTGGTCCAAATGATATCTTTGCCAAACTATCCGACATTCGAAGTACATTAGCGGGGGACTGGCCTCTTGAAAAACTAGTTCATGTTGTTGAAAAACTCCAATGTCGAGCTCACGGTCGAGATGGAGTTGCCATAAGGGTGTCTGGATCCTTCATCATTGGGAACCAGTTCCTCATATGCGGAGACGGCGTACAAGTCGAGGGATTGCCAAATTTTAAGGATCTCTCCATCGACATGGCCAGTAAGAAAATGGGATCCTTCCGGGAGCAGCTGATCATCGAACCAAGCAACCTCATTGGTCGGTACTTCATAGCCAAACAAGAGCTTTATATAATTCAATAG 1557 43.29 MAGLEELKKKLTPLFDAEKGFSMDSPVNPSDSYTFSDNGTVNLLSRSYGVYNFNELGLQKCTSWLADDSGSSERTYRCASREMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLRLKKCIPEPVLSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPSPSKQKFSPEFCSFVDACLQKDADARPTAEQLLSHPFIKKYEDEQVDLAAFVQNVFDPIQRMKDLADMLTIHYYLLFDGPDEFWHHTKALYNESSTLSFSGKQFSGPNDIFAKLSDIRSTLAGDWPLEKLVHVVEKLQCRAHGRDGVAIRVSGSFIIGNQFLICGDGVQVEGLPNFKDLSIDMASKKMGSFREQLIIEPSNLIGRYFIAKQELYIIQ 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 64829880 64836267 + Tan0004156.1 Tan07g1394 758925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1394 518 FunFam mitogen-activated protein kinase kinase 3 165 361 - -
Tan07g1394 518 Gene3D Transferase(Phosphotransferase) domain 1 159 361 - -
Tan07g1394 518 Gene3D - 362 517 - -
Tan07g1394 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1394 518 FunFam mitogen-activated protein kinase kinase 3 56 164 - -
Tan07g1394 518 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1394 518 CDD PKc_MAPKK_plant_like 84 343 - -
Tan07g1394 518 Gene3D Phosphorylase Kinase; domain 1 77 158 - -
Tan07g1394 518 FunFam Mitogen-activated protein kinase kinase 3 363 517 - -
Tan07g1394 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Tan07g1394 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1394 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 63 372 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Tan07g1394 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524(InterPro)
Tan07g1394 518 SUPERFAMILY Protein kinase-like (PK-like) 85 368 IPR011009 -
Tan07g1394 518 SUPERFAMILY NTF2-like 364 516 IPR032710 -
Tan07g1394 518 SMART serkin_6 83 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1394 Tan-Chr7:64829880 Tan08g0109 Tan-Chr8:951011 1.20E-65 dispersed
Tan07g1394 Tan-Chr7:64829880 Tan09g1114 Tan-Chr9:63452776 9.70E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67875 PF00069 Pkinase 1.70E-59 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1394 K20607 - csv:101217978 999.964