Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1408 ATGGGTTCTGGTAATGGGTTTTATTCCACTGGTGAATTCAATTTGGATTCCAAATGGTTGATTGATCCTAAGCATCTTTTTGTTGGGCCGAAGATTGGGGAAGGTGCCCATGCCAAGGTGTATGAGGGAAAGTACAAAAATCAGATTGTGGCTATTAAAATGGTGGGTAAAGGAGATACTCCTGAGAGGATGGCCAGAAGAGAAGCTCGCTTTGCCAGAGAGGTTGCAATGTTGTCCAAAGTGCAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTGACTGAATTACTCACAGGTGGTACATTGCGCAAGTACCTCTTGAATTTGAGGCCAAGGAGCTTGGAACTTGATGTAGCGATCGGGTTCGCGCTTGATATTGCTCGTGCTATGGAGTGTTTACACTCCCATGGAATCATTCACCGTGACCTTAAACCAGAGAACTTAATATTGACTGCAGACCATAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCAAGAGAAGAATCAGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGATGGATGGCTCCAGAGCTCTACAGTACAGTAACTTTAAAACATGGAGATAAAAAGCATTACAATCATAAAGTTGATGCTTACAGCTTTGCCATTGTATTGTGGGAGCTCATCCTCAACAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCGGCGTACGCAGCTGCTTTTAAGAACATGAGGCCTAGTGCTGAAAATCTTCCAGAGGACTTAGCTTTAATAGTGACATCATGTTGGAGAGAGGATCCAAATACAAGGCCAAACTTCAGCCAGATTATACAGATGCTCTTGCAGTCCCTCTCTAGAATATCACCACGAGCACCCGTGATCCCGCCTCGGATATGTGCTTCTGAAAATGTCGTGATGCCACCTGAATCTCCTGGTACAAATTCCTTGATGGCTGTCAGGCATGGCTCGGGGGAAGCCTCGCATGGCATGATCGAAGAAAACCCGAAAAGCTCTTTCTTCTGCTTTAACAAGTGTTACTGA 1059 44.19 MGSGNGFYSTGEFNLDSKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGKGDTPERMARREARFAREVAMLSKVQHKNLVKFIGACKEPMMVIVTELLTGGTLRKYLLNLRPRSLELDVAIGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALIVTSCWREDPNTRPNFSQIIQMLLQSLSRISPRAPVIPPRICASENVVMPPESPGTNSLMAVRHGSGEASHGMIEENPKSSFFCFNKCY 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 65124226 65127547 + Tan0005129.1 Tan07g1408 758939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1408 352 Gene3D Transferase(Phosphotransferase) domain 1 106 297 - -
Tan07g1408 352 CDD STKc_MAP3K-like 32 286 - -
Tan07g1408 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 FunFam Kinase suppressor of Ras 1 15 105 - -
Tan07g1408 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 57 IPR017441 GO:0005524(InterPro)
Tan07g1408 352 SUPERFAMILY Protein kinase-like (PK-like) 17 309 IPR011009 -
Tan07g1408 352 PANTHER SERINE-THREONINE PROTEIN KINASE 20 290 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan07g1408 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 SMART serkin_6 26 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1408 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Tan07g1408 352 Pfam Protein tyrosine and serine/threonine kinase 30 286 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1959 Tan-Chr3:74710200 Tan07g1408 Tan-Chr7:65124226 2.00E-83 dispersed
Tan07g1408 Tan-Chr7:65124226 Tan08g2223 Tan-Chr8:73840664 1.50E-117 dispersed
Tan11g0659 Tan-Chr11:5787079 Tan07g1408 Tan-Chr7:65124226 2.20E-110 wgd
Tan07g1408 Tan-Chr7:65124226 Tan09g2306 Tan-Chr9:72970771 1.70E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67877 PF07714 PK_Tyr_Ser-Thr 2.20E-57 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1408 - - - 0.0