Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1504 ATGAGTTGCGGTTCGGATTTGATGTCTGGGAATTCTGAGGCTGATGATCGTGAGATTGTAGAGAAGGATCCAACTGGACGTTATATGCGGTGCGACGAGATTTTGGGTAAAGGGGCATTCAAGACAGTATACAAAGCTTTCGATGAAGTTGGTGGAATCGAAGTTGCTTGGAGCCAAGTGGACGTTGAAGATGTTTTGCAGTCACCAGAACAACTTCAAAGATTATATTCTGAGGTTCATCTGCTGAAGTCACTGAAACATGAGAATATCATCAAGTTCTATAGCTACTGGGTTGATGATAAGCATAAGACTATCAACATGATAACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCACAGGAAAGTTGACTTGAAGGCCTTCAAGAACTGGGCAAGGCAGATACTGCAGGGTTTAACGTATTTGCATGGTCACAATCCTCCAATTATTCACAGGGATTTGAAATGTGATAATATATTTGTCAATGGAAATACTGGAGAAGTTAAAATTGGAGATCTCGGATTAGCGATTGTCATGCAGCAACCTACTGCCCGAAGTGTTATTGGCACTCCAGAGTTCATGGCTCCAGAGCTCTATGATGAGGATTACAATGAACTTGTTGACATCTATTCTTTTGGCATGTGCATGTTGGAAATGGTCACTTGTGAATACCCATATAATGAGTGCAAAAATTCTGCCCAAATATTCAAGAAGGTTACTTCTGGTATAAAGCCTGCTTCCCTTGAAAAAGTGGTGGACCCTCAAGTTAAGCAGTTCATAGAGAAGTGTCTGGTTCCAGCATCCATGAGATTGCCTGCAAGTGAACTCTTGAAAGATCCATTCCTTGCAGTTGAAAGCCCCAAGGAGCATAGTTCTGAACCTTCAAGGTTATTGAATGAACAGTTCAAATCAGTAAATCCTCCACTGCTGGCTACTAATCCAATGGACATAGACCATAACTACAACAAACTCTCAGGCTTGGTAGCCTCATCTGTCGAAAGCAATAATGAAATTTCTCACTTTTCAACTCTAGAACTTCAGAGGCTCACTAAGAACCATGAGTTGACACTGAAAGGGGACATGATCGATCATAATACGATTTCGTTCCATTTGCGCATTGCTGAACTATGTGGTAAATCTAAGAATATCCATTTTGCCTTCTATCTCGATTCTGATACTGCTTTGACTATTGCTTTGGAGATGGTTGAACAACTTGAACTGTCAAGTGAAGATGCAACTATCATAGCTAAATTGATTGATGAATTAATTGCGAAGTTTGTTCCCAGCTGGAAATCATGTGCAAATTATTGTCACAGACAAACTACGGCAAATAGTTCTTCCGAAACCGAAGAGGATAAGACCTCTATTCCTCCTCTCTTCTCTGAGCTGGTACTGTCATCTCCCTTGGTGGCTGCTGTCAGGAAAACTCCGACACATTTGGCCGAGGTGGAAGATCAGGAGAACCCGCAGACGATTATATCGTGTGCTTTTCTGGACTACAATCACTCAACTGTCTCAGATTACAGCATCGGAAAAGGATCAGAGTGTGGTGACTTCAACCACCCCGAGTGCGAAAAAGCTTTTATTAGCAATGGAACAATTGATTTTGATGCTGTTGGACCTATTTCGACGACGATCGATTTTGCAAAACCATCTCTAATCTCCTCCTGCTCAGGAATGTCCAAAGAATTGAGCTTGTCTAGCTTTTCCACTCTTTCTCTGGACGAAAGAGACCACCATGATGAACTCAAGATGGAGATTGATGCTATTGACTTGCAGTACCACCAGTGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCTATAGAAAGTGCCAAGAAGAGGTGGATGTCAAAGAAGAAAGCTTCTACTATTTGA 1890 41.69 MSCGSDLMSGNSEADDREIVEKDPTGRYMRCDEILGKGAFKTVYKAFDEVGGIEVAWSQVDVEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYSYWVDDKHKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILQGLTYLHGHNPPIIHRDLKCDNIFVNGNTGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEDYNELVDIYSFGMCMLEMVTCEYPYNECKNSAQIFKKVTSGIKPASLEKVVDPQVKQFIEKCLVPASMRLPASELLKDPFLAVESPKEHSSEPSRLLNEQFKSVNPPLLATNPMDIDHNYNKLSGLVASSVESNNEISHFSTLELQRLTKNHELTLKGDMIDHNTISFHLRIAELCGKSKNIHFAFYLDSDTALTIALEMVEQLELSSEDATIIAKLIDELIAKFVPSWKSCANYCHRQTTANSSSETEEDKTSIPPLFSELVLSSPLVAAVRKTPTHLAEVEDQENPQTIISCAFLDYNHSTVSDYSIGKGSECGDFNHPECEKAFISNGTIDFDAVGPISTTIDFAKPSLISSCSGMSKELSLSSFSTLSLDERDHHDELKMEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKASTI 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66306093 66310772 - Tan0009710.1 Tan07g1504 759035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1504 629 CDD STKc_WNK 27 286 - -
Tan07g1504 629 MobiDBLite consensus disorder prediction 1 21 - -
Tan07g1504 629 Gene3D Phosphorylase Kinase; domain 1 12 110 - -
Tan07g1504 629 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1504 629 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1504 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1504 629 Gene3D Transferase(Phosphotransferase) domain 1 112 291 - -
Tan07g1504 629 SMART serkin_6 29 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1504 629 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Tan07g1504 629 SUPERFAMILY Protein kinase-like (PK-like) 31 287 IPR011009 -
Tan07g1504 629 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 477 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan07g1504 629 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Tan07g1504 629 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 384 428 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Tan07g1504 629 Gene3D - 369 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1504 Tan-Chr7:66306093 Tan10g0091 Tan-Chr10:1193348 1.70E-172 dispersed
Tan07g1504 Tan-Chr7:66306093 Tan05g2466 Tan-Chr5:75814122 2.90E-18 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67878 PF00069 Pkinase 4.20E-52 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1504 K08867 - csv:101207748 1069.68