Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1529 ATGACTTTTCATGGAGGAGATTCGTATACGCAGTCTTGTGTTTCGACTCAAGGCTGTGGAAGAGATGATCTGTATATGGAGCTATGGAGGGCTTGTGCAGGTCCACTGGTTGATGTACCTCGAGTCGATGAGAGAGTCTTCTATTTCCCTCAGGGGCATATGGAACAATTAGAGGCATCGACAAATCTGGAGCTGAATAAGAGAATTCCTCTGTTTAATCTTTCCTCAAAGATTCTCTGTCGTGTAATTCATATCGAGCCACTGGCAGATCATGAATCGGATGAGGTTTATGCACAAATGACTTTAATGCCGGAATCAAATCAAAGTGAGCCTAAAAGTCTAGATCCATGCCCTCCTGAACCAGCTAGACCAGTTGTTCATTCGTTCTGTAAGGTTTTAACTGCTTCTGATACCAGCACTCATGGTGGGTTTTCTGTCCTCCGAAAACATGCTAATGAGTGCCTACCTCCTTTGGACATGACTCAGGCTACCCCAACTCAGGATTTGGTAGCCAAGGATCTTCATGGATATGAGTGGCGATTCAAACATATTTTCAGAGGTCAGCCACGAAGGCACCTGCTAACGACTGGGTGGAGTACATTTGTTATGTCTAAAAGGTTATCTGCTGGAGATTCCTTTGTGTTCTTGAGGGGAGACAATGGGCAGTTGCGTGTTGGTGTGAGGCACCGTGCTCGACAGCAAAGTAGCATGCCACCATCTGTGATATCGAGTCAGAGCATGCACCTAGGAGTGCTTGCAACTGCATCTCATGCTGTTACAACCCAAACCCGTTTTGTTGTCTATTATAAACCTAGGACATGTCAGTTCATAATAAGTCTGAATAAATACTTGGAAGCAGTCAATAACAATTTTTCTCTTGGCATGAGATTCAACATGAGTTTTGAGGGAGAGGATTCTCCAGAAAGAAGGTTTTCAGGAACTATAATTGGAGCTGGAGATATTTCACCTCATTGGGCTAATTCAAGCTGGAGATCACTAAGAGTTCAATGGGATGAGCAAACATCTATTCTAAGACCTGACAGGGTTTCGCCTTGGGATATAGAACCACTCACGTCTTCAGCAGTCACAAGTCTATCTCAACCCATTTCAAAAAACAAAAGGCCTCGACAACCAACTGAGACTCCAGCTCTTGATGGTGCTGATATGACTAAGTCAGCACATTGGGATTCTGGATTGGCACAGTCTCATGACGGTAAACAGTGCAGCAATGCAGCTGAAAGTAGAAAAGGTGAAAATAATGAATTGTGTCATCATAGTGAGACAGACACTATCAGCAACAGCACATGGGTATCAAAAACACAGACTGATGGGACCTGGCTATCTTCTACCCAATCCAATGGTTATAAACACCCAGTAAATGACATAGCGCAGGATTATAAAACTGTCCCTGTCTGTGGTTGGTCTTTTCTGTCAGGACCTTCAAAGTTAAGTGATGATCAAATACTTGATCCCTCTGAAAATGGGAGGAAAGGCGAAACAGTAGCTAGTTGTAGATTGTTTGGTATTGATCTCAATCATTTGGCTAATCTTCCTGCTGAGAAAGCATCTTCTCAACCAAGCAATATGTCTAGTGACACAGACGGGCGCATCAGTACCTTGTCAGTGGCTCAGTCCGATCCAAAATCTGACAACCTGGAGGTCTCTATAGAAAGAAAGTCGGAACCATTACAAGCATCTCTGAAGGAGACTCAAAGTAGCTCAACTAACACTAGAAGCCGCACCAAGGTTCACATGCATGGAATGGCCGTGGGTAGGGCAGTGGACTTAACAATCTTAGAAGGCTATGAACAACTAATAGATGAACTTGAGAAGATGTTTGATGTCAGTGGACAGCTGTCTGCTCGAGATAAGTGGGAGATTGTATATACTGACGATGAAGGTGATATGATGCTTGTTGGAGATGATCCATGGGAAGAATTTTGTAACATGGTGAGAAGAATTTTTATATGCTCTAGGGAGCAAGTGAAAAAGATGAGCTCAGGAAGCAAGCAGCTGACGTCAATAGAAGTTGAAGGGGCAGTAGTAAACCCCGACTCCCCTGCAATTTGA 2070 43.67 MTFHGGDSYTQSCVSTQGCGRDDLYMELWRACAGPLVDVPRVDERVFYFPQGHMEQLEASTNLELNKRIPLFNLSSKILCRVIHIEPLADHESDEVYAQMTLMPESNQSEPKSLDPCPPEPARPVVHSFCKVLTASDTSTHGGFSVLRKHANECLPPLDMTQATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVMSKRLSAGDSFVFLRGDNGQLRVGVRHRARQQSSMPPSVISSQSMHLGVLATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNNFSLGMRFNMSFEGEDSPERRFSGTIIGAGDISPHWANSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTSLSQPISKNKRPRQPTETPALDGADMTKSAHWDSGLAQSHDGKQCSNAAESRKGENNELCHHSETDTISNSTWVSKTQTDGTWLSSTQSNGYKHPVNDIAQDYKTVPVCGWSFLSGPSKLSDDQILDPSENGRKGETVASCRLFGIDLNHLANLPAEKASSQPSNMSSDTDGRISTLSVAQSDPKSDNLEVSIERKSEPLQASLKETQSSSTNTRSRTKVHMHGMAVGRAVDLTILEGYEQLIDELEKMFDVSGQLSARDKWEIVYTDDEGDMMLVGDDPWEEFCNMVRRIFICSREQVKKMSSGSKQLTSIEVEGAVVNPDSPAI 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66539205 66544272 + Tan0022852.1 Tan07g1529 759060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1529 689 SMART B3_2 129 231 IPR003340 GO:0003677(InterPro)
Tan07g1529 689 MobiDBLite consensus disorder prediction 361 377 - -
Tan07g1529 689 Gene3D - 126 231 IPR015300 -
Tan07g1529 689 FunFam Auxin response factor 127 231 - -
Tan07g1529 689 FunFam Auxin response factor 573 666 - -
Tan07g1529 689 Pfam Auxin response factor 255 333 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Tan07g1529 689 MobiDBLite consensus disorder prediction 518 581 - -
Tan07g1529 689 Gene3D - 573 666 - -
Tan07g1529 689 ProSiteProfiles PB1 domain profile. 578 659 IPR053793 -
Tan07g1529 689 FunFam Auxin response factor 290 361 - -
Tan07g1529 689 SUPERFAMILY DNA-binding pseudobarrel domain 120 258 IPR015300 -
Tan07g1529 689 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 23 667 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Tan07g1529 689 Pfam B3 DNA binding domain 129 229 IPR003340 GO:0003677(InterPro)
Tan07g1529 689 CDD B3_DNA 127 228 IPR003340 GO:0003677(InterPro)
Tan07g1529 689 Gene3D - 290 363 - -
Tan07g1529 689 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677(InterPro)
Tan07g1529 689 MobiDBLite consensus disorder prediction 518 550 - -
Tan07g1529 689 MobiDBLite consensus disorder prediction 361 421 - -
Tan07g1529 689 MobiDBLite consensus disorder prediction 565 581 - -
Tan07g1529 689 MobiDBLite consensus disorder prediction 402 416 - -
Tan07g1529 689 SUPERFAMILY CAD & PB1 domains 572 654 - -
Tan07g1529 689 Pfam AUX/IAA family 624 656 IPR033389 -
Tan07g1529 689 Pfam AUX/IAA family 568 614 IPR033389 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1746 Tan-Chr6:35638917 Tan07g1529 Tan-Chr7:66539205 2.80E-200 dispersed
Tan07g1529 Tan-Chr7:66539205 Tan11g2197 Tan-Chr11:59274760 1.30E-173 dispersed
Tan01g1062 Tan-Chr1:10454652 Tan07g1529 Tan-Chr7:66539205 1.00E-234 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27977 PF02309 AUX_IAA 5.60E-07 CL0072 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1529 K14486 - csv:101209208 1224.92