Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1537 ATGGCTGGTTCCTGGAGAGCTCGAGGTTCTCTGATCGTGCTGGCAATCGTCTTCTTCGGATGCCTATTCGCAATCTCCATTGCGAAGGAGGAAGCAACGAAGTTGGGGACTGTCATTGGGATTGATTTGGGAACCACTTATTCTTGTGTTGGAGTCTACAAGAACGGTCATGTAGAAATTATAGCGAATGACCAAGGAAACCGTATCACCCCTTCTTGGGTCGCTTTCACTGATAGTGAGAGATTGATCGGTGAGGCTGCGAAGAATCAAGCAGCTGTCAACCCTGAAAGGACGGTCTTTGATGTCAAGAGACTTATCGGTAGAAAGTTTGATGATAAGGAAGTTCAGAAAGACATGAAACTTGTTCCTTACAAGATTGTGAATAAGGATGGAAAGCCTTACATTCAAGTAAAGATCAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAAGTCAGTGCTATGATTCTCACTAAGATGAAGGAAACAGCCGAAGCATTCCTTGGCAAGAAGATCAAGGATGCCGTCGTCACTGTTCCAGCTTACTTCAACGATGCCCAAAGGCAAGCAACCAAAGATGCCGGTATTATTGCTGGCCTTAACGTTGCTAGGATCATCAATGAGCCCACTGCGGCTGCTATTGCGTATGGTTTGGACAAGAAGGGAGGCGAGAAGAACATTCTTGTATTTGATCTCGGTGGTGGTACTTTTGATGTCAGCATCTTGACCATTGACAATGGTGTTTTTGAGGTTCTTGCCACAAACGGAGACACTCACTTGGGAGGTGAGGACTTTGACCAGAGAATTATGGAATACTTCATCAAATTGATCAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGAAAGCTTAGAAGGGAATGTGAGCGCGCCAAGAGGGCATTGAGTAGCCAGCACCAGGTCCGCGTTGAGATTGAATCCCTCTTCGATGGTACTGACTTCTCTGAGCCATTGACCAGAGCTCGATTTGAGGAGTTGAACAACGACTTGTTCAGAAAGACCATGGGACCAGTGAAGAAGGCCATGGAAGATGCAGGTTTGGAGAAGAACCAAATCGACGAGATTGTCCTTGTTGGTGGTAGCACCAGAATTCCCAAAGTTCAACAGCTCCTCAAAGACTACTTCGAGGGCAAGGAACCTAACAAGGGTGTGAACCCTGATGAGGCCGTTGCCTATGGTGCTGCTGTTCAAGGAAGCATCTTGAGTGGAGAGGGTGGCGAAGAAACCAAAGACATCCTTCTTCTTGACGTTGCCCCTCTTACCCTTGGAATTGAGACTGTTGGTGGAGTGATGACCAAGTTGATCCCCAGAAACACTGTCATCCCAACCAAGAAATCTCAGGTCTTCACCACTTACCAGGATCAGCAGACCACCGTCTCCATTCAGGTCTTCGAAGGTGAGAGGAGTCTCACTAAGGACTGTAGGAACCTTGGCAAATTCGATCTAAATGGAATTCCTCCAGCACCAAGGTACGCCTTTTTTCCCCTGATCCTTCATTTTCTCTCAACGGCAAATATTTCCAGATGTATAAACTATGTTTGTTCTTGA 1581 46.68 MAGSWRARGSLIVLAIVFFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFDDKEVQKDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRECERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLNGIPPAPRYAFFPLILHFLSTANISRCINYVCS 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66613924 66617946 + Tan0012222.2 Tan07g1537 759068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1537 526 FunFam Chaperone protein HscA homolog 227 275 - -
Tan07g1537 526 FunFam Heat shock protein 70 39 226 - -
Tan07g1537 526 FunFam Endoplasmic reticulum chaperone BiP 261 344 - -
Tan07g1537 526 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 65 77 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 395 415 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 422 441 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 37 50 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 175 195 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 363 379 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 87 95 - -
Tan07g1537 526 PRINTS 70kDa heat shock protein signature 235 245 - -
Tan07g1537 526 Gene3D Actin; Chain A, domain 4 261 344 - -
Tan07g1537 526 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
Tan07g1537 526 PANTHER HEAT SHOCK PROTEIN 70KDA 38 502 IPR013126 GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005788(PANTHER)|GO:0016020(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)|GO:0034663(PANTHER)|GO:0140662(InterPro)
Tan07g1537 526 Gene3D - 221 395 - -
Tan07g1537 526 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
Tan07g1537 526 Coils Coil 285 305 - -
Tan07g1537 526 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 411 503 IPR029047 -
Tan07g1537 526 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Tan07g1537 526 CDD HSPA5-like_NBD 36 410 IPR042050 -
Tan07g1537 526 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
Tan07g1537 526 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 502 IPR029047 -
Tan07g1537 526 Gene3D - 39 410 - -
Tan07g1537 526 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
Tan07g1537 526 Pfam Hsp70 protein 38 501 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1537 Tan-Chr7:66613924 Tan11g0735 Tan-Chr11:6275588 3.20E-180 dispersed
Tan07g1536 Tan-Chr7:66613924 Tan07g1537 Tan-Chr7:66613924 2.10E-285 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1537 K09490 - csv:101207505 968.378