Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1550 ATGGCTTTCTTTCAACCCCATCTTCCTCCCATTCATTCTTCATTAACCCTCTTTCTCATTCTCCTTATCATGCCATTGCTCCGCCCCGCTGCCCCCATCACTCTGCCGGAAGTTTTATCCCCCCACTTTCCCGATAGGGGTCCGGTTATTCCGGTCACCAATCTCGTCAAGTTCCTCGAGCGTCTTCAGCTTGTGGCATTCAACTCCTTCGGTAAGGTGGATTTTGATCTTAAATACTATGTTGATTTGTCGCTTAAATTCGATTTGAATGCTACCGAGAGGGCTTTCGATGCCCTTCGACGATCCCCCAATGGCTCTGTTCCGGTGGAGGATTTGAAGGCCTTTATTAGAGAGTATTTCGATAGTGCTGGAACCGATTTGGTGTACTCCGACCCGGTAGATTTTGTCCCTCTGCCTCAAGGGTTTTTGCCGAAGGTGGAGAATGCGGAGGTTAGAGCTTGGGCTTTGGATATTCATAATTACTGGAAGAATCTTAGCCGGAGAGTCTCCGATGATCTCATTCATCGCCCGGATACTCACACTTTATTGCCGTTGCCGGAGCCCTGTGTCATTCCGGGTTCCAGATTCCGGGAAGTTTACTATTGGGATTCATATTGGATTATCAGAGGTTTGTTAGCTAGTAAAATGTATGATACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTCTGAATGGTGCTAGAGCTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATATTCCTTAGAACAGGGGATTTAGAGTTTGTGAGAAATGCACTCCCAGCTTTGATCAAAGAGCATAAGTTTTGGAATTCAGGGTTCCATTCAATTACTGTCCGGAATGCACCTGGTGGAGATCATTCTTTGTCTAGGTATTATGCAATGTGGAACGAGCCGAGGCCCGAATCTTCACTGCTGGATGAGAAGCTTGCTTCAAAGTTTGTAGATAACTATGAAAAGCAGGATTTATACCGAGAACTCGCATCAGCAGCTGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCACACGGACTTGTCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATTTGTCAAGAGCTGTTGGAGATTACTGCACTGCAGACCACTTTTTGGAGGCTTCTCTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATGGCTCTTACAAGGGTGCCCGTACATGGGATGCTCGGAACCAGAACCAGAACATATATGCTTCAAACTTCATTCCATTGTGGATCGAATCGTTCTACTCCGATAGCAGACAGATGAAGAAAGTCTTGAAAAGTTTACGGAACTCGGGCTTGCTGTGCAATGCTGGGATTGCAACTTCAATAATCAATACCGGAGAACAATGGTTAGTAAAACTGAATCTTAGGAACTGA 1527 44.27 MAFFQPHLPPIHSSLTLFLILLIMPLLRPAAPITLPEVLSPHFPDRGPVIPVTNLVKFLERLQLVAFNSFGKVDFDLKYYVDLSLKFDLNATERAFDALRRSPNGSVPVEDLKAFIREYFDSAGTDLVYSDPVDFVPLPQGFLPKVENAEVRAWALDIHNYWKNLSRRVSDDLIHRPDTHTLLPLPEPCVIPGSRFREVYYWDSYWIIRGLLASKMYDTAKGIVINLISMIDEFGHVLNGARAYYTNRSQPPLLSSMVYDIFLRTGDLEFVRNALPALIKEHKFWNSGFHSITVRNAPGGDHSLSRYYAMWNEPRPESSLLDEKLASKFVDNYEKQDLYRELASAAESGWDFSSRWMRDHTDLSTLATTSILPVDLNVFILKMELDISNLSRAVGDYCTADHFLEASLVRKKTINSIFWNSEKGQWLDYWLDNGSYKGARTWDARNQNQNIYASNFIPLWIESFYSDSRQMKKVLKSLRNSGLLCNAGIATSIINTGEQWLVKLNLRN 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66683739 66687823 - Tan0022218.2 Tan07g1550 759081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1550 508 Gene3D - 60 503 IPR012341 GO:0005975(InterPro)
Tan07g1550 508 PRINTS Glycosyl hydrolase family 37 signature 234 252 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Tan07g1550 508 PRINTS Glycosyl hydrolase family 37 signature 371 388 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Tan07g1550 508 PRINTS Glycosyl hydrolase family 37 signature 414 430 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Tan07g1550 508 PRINTS Glycosyl hydrolase family 37 signature 339 356 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Tan07g1550 508 PRINTS Glycosyl hydrolase family 37 signature 304 321 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Tan07g1550 508 Pfam Trehalase 75 500 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Tan07g1550 508 PANTHER TREHALASE 59 500 IPR001661 GO:0004555(InterPro)|GO:0004555(PANTHER)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Tan07g1550 508 SUPERFAMILY Six-hairpin glycosidases 68 500 IPR008928 GO:0005975(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1549 Tan-Chr7:66683739 Tan07g1550 Tan-Chr7:66683739 4.60E-300 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1550 K01194 - csv:101208719 872.078