Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1580 ATGGAAATTCTGTGGATTTTCCGCTTCGTTTTCGTTCTGGGGTTGGTTTTTTCGCCGAGCAATGGCGACCCAGTTGAAGATAAGCGAGCTCTGCTTGATTTTGTCAAGAATCTCCCTCATTCTCGCTCTCTTAATTGGAATGCAGCTTCTCCGGTTTGCCATTACTGGACTGGTATAACTTGCAGTGAAGACGAGTCTCGTGTTATAGCCGTTCGATTGCCCGGAGTTGGCTTCCACGGCCCCATTCCGGCGAACACTCTCAGCCGGCTCTCGGCGCTGCAAATATTGAGCCTCAGATCCAACCGTATAACGGGGGATTTCCCTTCTGATTTCTCGAATCTTAGTAACTTGTCCTATCTTTATCTTCAGTTCAACAGCTTCTCTGGGCCATTGCCTTCCAATTTCTCTGTTTGGAAGAATCTCACCTTTGTGAATCTCTCTAACAATGGCTTCAATGGCCGCATTCCTTATTCACTTTCTAATCTGACAGCGCTCACGGGTTTGAATCTCGCAAATAACTCTCTCTCGGGAGAAATACCCGACCTCCAAATGCCCAAATTACAGGTTCTGAATTTGTCTAACAACAATCTGAGTGGAAGTGTGCCTAAATCTTTACAGAGATTTCCAAGGTCTGTATTTGTAGGCAATGCCATATCTTTTGAAAGTTCTTCACCAAACAATCCTCCTGTGCCTCCACCATTGCCCGTGTCGAATGAAAAGCCGAAGAATGCTGGGGGGCTGGGAGAAGCAGCATTGTTAGGAATTATAATTGCTGGTGGTATTTTGGGGCTTTTAGCATTCGGCTTTCTGATACTTGTTTGCTGTTCTAGAAGGAAGAGGGAAGAATATTCCGGGGATCTGCAGAAAGGTGGAATGTCGCCGGAGAAAGTGATATCAAGGACTCAAGATGCAAACAACAGATTGGTTTTCTTTGAGGGGTGCCATTATGCTTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTCTTGGGGAAGGGAACTTTTGGTACTGCATACAAAGCAATTCTAGAGGATGCCACCACCGTTGTTGTTAAGAGGTTGAAGGATGTAAGCGCTGGGAAACGTGATTTCGAGCAACAAATGGAGATTGTTGGCAGTATTAGGCATGAGAATGTGGTTGAGTTGAAGGCCTACTATTATTCCAAAGATGAGAAGCTGATGGTCTATGATTTCTATGGTCAAGGAAGCGTCTCGGCTATGTTACACGGTAAACGTGGAGAGGAAAAGACCCCGTTAGATTGGGACACCAGACTGAGAATTGCAGTTGGTGCAGCACGAGGCATCGCCCGCGTCCATGCCGAAAATGGAGGGAAGCTCATCCATGGAAATGTGAAATCCTCAAACATCTTTCTGAACTCTCAACAGTATGGATGTGTGTCTGATCTTGGACTAGCAACCATAACAAGCTCGCTCTCTCCACCAATATCCCGCGCTGCTGGTTACCGAGCCCCTGAAGTGACAGACACCCGCAAGGCGACTCAGGCTTCAGACATTTTCAGCTTCGGCGTGGTGCTCCTCGAGCTTCTAACCGGAAAGTCTCCGATACATGCTACGGGCGGTGAAGAGATCGTCCACTTGGTGAGATGGGTCCATTCAGTTGTCCGAGAGGAGTGGACAGCTGAAGTATTTGATGTAGAGCTGATGAGATATCCTAACATAGAGGAAGAAATGGTTGAGATGTTACAGATAGCCTTATCATGTGTGGCCAGGATACCAGATCAGAGACCAAAAATGGCAGAAGTTGTGAAGATGATCGAAAGCGTTCGACCAATGGAAGCCGAGAATCGACCTTCTTCCACGTACCAATCTGAAAGTTCAATGCCGCAAGCTGTTGGGACAGAAAATTCAACCTCTCAGTGA 1884 46.82 MEILWIFRFVFVLGLVFSPSNGDPVEDKRALLDFVKNLPHSRSLNWNAASPVCHYWTGITCSEDESRVIAVRLPGVGFHGPIPANTLSRLSALQILSLRSNRITGDFPSDFSNLSNLSYLYLQFNSFSGPLPSNFSVWKNLTFVNLSNNGFNGRIPYSLSNLTALTGLNLANNSLSGEIPDLQMPKLQVLNLSNNNLSGSVPKSLQRFPRSVFVGNAISFESSSPNNPPVPPPLPVSNEKPKNAGGLGEAALLGIIIAGGILGLLAFGFLILVCCSRRKREEYSGDLQKGGMSPEKVISRTQDANNRLVFFEGCHYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKDVSAGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDFYGQGSVSAMLHGKRGEEKTPLDWDTRLRIAVGAARGIARVHAENGGKLIHGNVKSSNIFLNSQQYGCVSDLGLATITSSLSPPISRAAGYRAPEVTDTRKATQASDIFSFGVVLLELLTGKSPIHATGGEEIVHLVRWVHSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIALSCVARIPDQRPKMAEVVKMIESVRPMEAENRPSSTYQSESSMPQAVGTENSTSQ 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 66979630 66983155 - Tan0001618.1 Tan07g1580 759111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1580 627 SUPERFAMILY L domain-like 37 208 - -
Tan07g1580 627 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515(InterPro)
Tan07g1580 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 400 607 - -
Tan07g1580 627 Pfam Leucine rich repeat 82 126 IPR001611 GO:0005515(InterPro)
Tan07g1580 627 SUPERFAMILY Protein kinase-like (PK-like) 329 611 IPR011009 -
Tan07g1580 627 MobiDBLite consensus disorder prediction 596 627 - -
Tan07g1580 627 Gene3D Phosphorylase Kinase; domain 1 292 399 - -
Tan07g1580 627 ProSitePatterns Protein kinases ATP-binding region signature. 331 362 IPR017441 GO:0005524(InterPro)
Tan07g1580 627 MobiDBLite consensus disorder prediction 601 627 - -
Tan07g1580 627 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Tan07g1580 627 PANTHER OS05G0588300 PROTEIN 9 610 IPR050994 -
Tan07g1580 627 Pfam Leucine Rich repeats (2 copies) 164 200 IPR025875 -
Tan07g1580 627 Pfam Protein tyrosine and serine/threonine kinase 329 592 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1580 627 Gene3D Ribonuclease Inhibitor 25 219 IPR032675 -
Tan07g1580 627 Gene3D Transferase(Phosphotransferase) domain 1 401 618 - -
Tan07g1580 627 MobiDBLite consensus disorder prediction 222 241 - -
Tan07g1580 627 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Tan07g1580 627 FunFam pollen receptor-like kinase 1 294 399 - -
Tan07g1580 627 ProSiteProfiles Protein kinase domain profile. 325 596 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0165 Tan-Chr1:1496340 Tan07g1580 Tan-Chr7:66979630 9.40E-171 dispersed
Tan07g0435 Tan-Chr7:8203060 Tan07g1580 Tan-Chr7:66979630 9.70E-155 dispersed
Tan07g0436 Tan-Chr7:8203060 Tan07g1580 Tan-Chr7:66979630 9.70E-155 dispersed
Tan07g1580 Tan-Chr7:66979630 Tan08g0198 Tan-Chr8:1771376 5.60E-131 dispersed
Tan01g0430 Tan-Chr1:3925902 Tan07g1580 Tan-Chr7:66979630 5.50E-43 transposed
Tan01g0164 Tan-Chr1:1496340 Tan07g1580 Tan-Chr7:66979630 9.40E-171 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67880 PF00069 Pkinase 3.40E-34 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1580 - - - 0.0