Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1607 ATGGCTACTAAAGAGTCGAGTTCTGCGACTGCCACTGAGGGCAAGATTAAAGGGGTTCTCACCCATGGCGGCCGATATGTGCAGTATAATGTGTACGGTAACTTGTTTGAGGTTTCCGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGGGCTTACGGCCTTGTTTGTGCTGCTGTAAATTCAGAGACCCATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCATTTGATAACATAATCGATGCCAAGAGAACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATTGCCATCAGAGACATTATTCGGCCACCAAAGAGAGAGGTTTTTAATGATGTGTATATTGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAACCACTGACAGACGATCATTGCCAGTACTTTTTGTATCAGTTATTGCGTGGGCTGAAATATGTACATTCAGCCAAGGTCCTGCACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGAGACTTTGGATTGGCAAGGACAACGTCTGAAACTGACTTCATGACTGAATATGTGGTTACTCGCTGGTACCGAGCACCTGAATTGCTCCTCAATTGTTCAGAGTACACTGCTGCTATTGATGTTTGGTCTGTTGGATGCATACTTGGTGAGATAATGACCAGAGAACCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTCAGGCTTATAACTGAGCTACTAGGATCACCAGATGATGCCAGCCTAGGATTTCTCCGAAGCGATAATGCTCGAAGATATGTCAAACAGCTTCCACAGTACAGGAAACAACAATTCTCAACTAGATTTCCCAACATGTCTCCAGCTGCCCTGGATCTTCTAGAAAAGATGCTTGTATTCGATCCCAACAAACGCATTACAGTTGAAGAGGCACTCTGTCATCCATACTTGCAATCTCTTCACGACATCAATGACGAGCCGGTCTGTGCCAGGCCTTTCAATTTTGATTTCGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTCATCTGGAAAGAATCCATCAGGTTCAATCCTGACGAATCAGCAAGGAGGACGACTCTTTGCGTTTGA 1152 43.49 MATKESSSATATEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQPLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSTRFPNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCARPFNFDFEQPSCTEEHIKELIWKESIRFNPDESARRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67447195 67452295 + Tan0010664.1 Tan07g1607 759138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1607 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1607 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Tan07g1607 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 365 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan07g1607 383 FunFam Mitogen-activated protein kinase 127 356 - -
Tan07g1607 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1607 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g1607 383 CDD STKc_TEY_MAPK 36 372 - -
Tan07g1607 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Tan07g1607 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Tan07g1607 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1607 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524(InterPro)
Tan07g1607 383 SMART serkin_6 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g1607 383 FunFam Mitogen-activated protein kinase 28 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2546 Tan-Chr1:36574048 Tan07g1607 Tan-Chr7:67447195 4.60E-119 dispersed
Tan06g1998 Tan-Chr6:63993402 Tan07g1607 Tan-Chr7:67447195 2.50E-139 dispersed
Tan07g1607 Tan-Chr7:67447195 Tan09g1832 Tan-Chr9:69723447 1.60E-93 dispersed
Tan01g1255 Tan-Chr1:12163295 Tan07g1607 Tan-Chr7:67447195 5.60E-115 transposed
Tan02g2001 Tan-Chr2:89172052 Tan07g1607 Tan-Chr7:67447195 2.50E-113 transposed
Tan02g2236 Tan-Chr2:91350240 Tan07g1607 Tan-Chr7:67447195 4.60E-163 transposed
Tan06g1997 Tan-Chr6:63993402 Tan07g1607 Tan-Chr7:67447195 9.10E-182 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67881 PF00069 Pkinase 8.40E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1607 K20600 - csv:101214254 778.474