Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1609 ATGGCGACTGAGATCTCGGGCGTTGCAACCGCCGCGCCGTACCGGTTTAATTACCCGAGACTCTTTCCGTCTCCCGGAGCCCCACGTGTGCGGTGGTTTTCGAAACAGAGCTCGAGGAGATCGTTGGCAGTGAAGATGAAAGATGGAGGTGAAAATAACGGCGTTGATGAATTTGAAATTGGTAAGGGTTTGAAGAAACTGACTGTGGAGGAGAAAATGGGGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGCTGCTGCAATTGTATCGAGCTTTGGGATCACGTCCATGGCCGCCATCGCTGTGTATTACCGATTCTCTTGCCAAATGGGGGACGGAGAGGTTCCATTTTTGGAAATGTTTGGCACATTCGCACTATCTGTGGGTTCAACTGTGGGGATGGAATTCTGGGCGAGATGGGCTCACAGACAGCTCTGGCATGCTTCCTTATGGGATATGCATAAGTCTCATCACAAGCCGAGGGATGGACCGTTTGAATTGAATGATGTGTTTGCGATTATGAACGCTGTGCCTGCTATTGCTCTCCTTTCTTTCGGCTTCTTCAATCAAGGCTTCTTTCCGGGGCTCTGTTTTGGTGCTGGTTTGGGAATTACGGTGTTTGGAATGGCTTACATGTTCGTCCACGATGGTCTCGTCCACCGTCGTTTCCCAGTGGGTCCCATAGCTGCCGTTCCTTACCTACGACGTGTCGCTGCTGCCCATCATCTTCATCACACGGACAAATTCGACGGAATCCCGTACGGATTGTTTTTAGGACCCAAGGAATTGGAAGAAGTGGATGGCGAGGTGGAGCTGCAGAAGGAAATTAAAAAGAGAAGCAAGGTTTACGGAAGTTGA 858 49.88 MATEISGVATAAPYRFNYPRLFPSPGAPRVRWFSKQSSRRSLAVKMKDGGENNGVDEFEIGKGLKKLTVEEKMGRKKAERDAYLAAAIVSSFGITSMAAIAVYYRFSCQMGDGEVPFLEMFGTFALSVGSTVGMEFWARWAHRQLWHASLWDMHKSHHKPRDGPFELNDVFAIMNAVPAIALLSFGFFNQGFFPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHLHHTDKFDGIPYGLFLGPKELEEVDGEVELQKEIKKRSKVYGS 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67460254 67463386 + Tan0015078.1 Tan07g1609 759140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1609 285 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 60 283 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Tan07g1609 285 Pfam Fatty acid hydroxylase 131 257 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0200 Tan-Chr1:1800328 Tan07g1609 Tan-Chr7:67460254 2.90E-90 dispersed
Tan01g0201 Tan-Chr1:1800328 Tan07g1609 Tan-Chr7:67460254 3.90E-56 dispersed
Tan01g0198 Tan-Chr1:1800328 Tan07g1609 Tan-Chr7:67460254 7.50E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1609 K15746 - csv:101214325 420.239