Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1612 ATGGGTGGAGAGATTTGTGAAGGAGAAGAGAAATCAAACGAGATGGTAGTTGGAGGAGGAGGATTTTACTACAATTCGAATTCGAACTCCCAATTCACGAGCCAGATGGAGACCGGGTTCGGATCGGGCGGGGAACCGGCGGAGATGTTCAATTTGGGGTCAACCGGCGGCGGCGGGGGGGAGTTTGATCAGAACATGATGGTGGTTGGGCCGTGGGGGACGGCGGCGCAAGAGAATAATAACAATAACAAATTCCATATAGTTGATGATGATGATGATGATTCTTCTTTGAGATGTGTGTTTCCATGTGAACCAAATGAGAGGCCAAGCCAAGGACTTTCTTTGTCTCTTAGTTCATCTAATCCTTCTTCTATTGGGTTACAATCTTTTGAACTCAGACCCCAACAACAAAATCAATCATCTTTGGCCATTTTTCAGCTACGAAACTCGAGGTTTTTGGGCCCAGCTCAGGAGCTTCTTTATGAGTTCTGTAGCCTTGGAATCAGCAATAACATCAAAGGCCTTGATTCTTCTTCTTCTTCACCAAAACACAAAGGGAATAATAGGCCAAAACAATGGGAATTTGAAGATGCCTCTTCTTCTAGGAACTTGTCACCTCTTCACTCACTTGATTTCATGGAGTTGCAAAAGAGAAAAACCAAGCTTTTTTCCATGCTTGAAGAGGTTGAAAGAAGGTACAGGCATTACTGCGAGCAAATGAAGGGGGTGGTGGCGTCGTTTGAGGCGGTGGCGGGGAGCGGGGCAGCGAGAGTTTACTCGGCGTTGGCTTCGAAGGCGATGTCGAGGCATTTTAGGTGCTTAAAAGATGGAATTATAGGGGAAATTAAGGCGACAAAAAAGGGAATGGGAGAAAAGGATCCAATTGCACCAGGTACCACAAGAGGAGAAACGCCAAGGCTTAGAGTGATCGATCAAGCTTTGAGGCAACAACGAGCTTTTCATCAAATTAGTATGATGGAAAGCCACCCTTGGCGCCCTCAACGTGGCCTTCCTGAGCGTTCTGTTTCTGTTCTTCGCGCTTGGCTTTTCGAACACTTTCTTCACCCGTACCCTAGCGATGTAGATAAGCATATTTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTGTCGAATTGGTTCATTAATGCGAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGAGATGTATTTGGAAGAAACAAAGGAGCAAGAAGAAGAGATCATTAACAACCATTTCAACAACAACTCTTCCGATGGGATGGCCGATTTCGATGACGAAATCGATGGTCAACGGTCGATCCCAACACGGCTGGTGGATCAAAAGCCAACACCGGACCAACTCTTAAGAATAGACTCTGAATGTCTCTCTTCAATTATCTCTAACAACTCAGAAAAGAACGATTCAAGAATCATGAAAACCATGCAAAACCACCACCACCACCTCCACAACCAGACCTTTGGACGAGTCGCCACCGATCAATTCGGCACGGTAGAGCTTGACTTCTCGTCCTACAACCACCACTCTGGTAGCGGTGGAGTTTCATACCCTAACAACAACAACAACCATCAACATTTCAATAATGGCAACGGTAGTGGCGTGTCGTTGACATTAGGGTTACAACAGCATGCAGCAGTCGGCGGTAACGGTGGCGGAGGGGTGAGCATCGCCTTTTCACCGGCGGCAGCACAGAGCTCCCTCTTCTTCTCAAGAGATCACATGGAAGAATGCCAACCAGTTCAATATTCACTTTTAGATGGAGAAACGCAGAATCTTCCTTACAGAAACTTGATGGGAGCTCAATTGCTTCATGACTTGGCCGGATAA 1827 46.74 MGGEICEGEEKSNEMVVGGGGFYYNSNSNSQFTSQMETGFGSGGEPAEMFNLGSTGGGGGEFDQNMMVVGPWGTAAQENNNNNKFHIVDDDDDDSSLRCVFPCEPNERPSQGLSLSLSSSNPSSIGLQSFELRPQQQNQSSLAIFQLRNSRFLGPAQELLYEFCSLGISNNIKGLDSSSSSPKHKGNNRPKQWEFEDASSSRNLSPLHSLDFMELQKRKTKLFSMLEEVERRYRHYCEQMKGVVASFEAVAGSGAARVYSALASKAMSRHFRCLKDGIIGEIKATKKGMGEKDPIAPGTTRGETPRLRVIDQALRQQRAFHQISMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEETKEQEEEIINNHFNNNSSDGMADFDDEIDGQRSIPTRLVDQKPTPDQLLRIDSECLSSIISNNSEKNDSRIMKTMQNHHHHLHNQTFGRVATDQFGTVELDFSSYNHHSGSGGVSYPNNNNNHQHFNNGNGSGVSLTLGLQQHAAVGGNGGGGVSIAFSPAAAQSSLFFSRDHMEECQPVQYSLLDGETQNLPYRNLMGAQLLHDLAG 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67497117 67501992 - Tan0009161.1 Tan07g1612 759143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1612 608 CDD homeodomain 331 392 IPR001356 GO:0003677(InterPro)
Tan07g1612 608 SUPERFAMILY Homeodomain-like 332 397 IPR009057 -
Tan07g1612 608 ProSiteProfiles 'Homeobox' domain profile. 328 391 IPR001356 GO:0003677(InterPro)
Tan07g1612 608 MobiDBLite consensus disorder prediction 175 202 - -
Tan07g1612 608 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 96 420 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan07g1612 608 SMART HOX_1 331 395 IPR001356 GO:0003677(InterPro)
Tan07g1612 608 Pfam Associated with HOX 147 278 IPR006563 -
Tan07g1612 608 FunFam BEL1-like homeodomain protein 4 334 396 - -
Tan07g1612 608 Pfam Homeobox KN domain 348 387 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan07g1612 608 Coils Coil 212 232 - -
Tan07g1612 608 Gene3D - 334 396 - -
Tan07g1612 608 SMART prehox3 141 280 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1091 Tan-Chr7:32115087 Tan07g1612 Tan-Chr7:67497117 4.50E-81 dispersed
Tan07g1092 Tan-Chr7:32115491 Tan07g1612 Tan-Chr7:67497117 4.50E-81 dispersed
Tan07g1612 Tan-Chr7:67497117 Tan08g1624 Tan-Chr8:65871483 2.50E-72 dispersed
Tan07g1612 Tan-Chr7:67497117 Tan08g1623 Tan-Chr8:65871483 2.50E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27982 PF07526 POX 1.10E-44 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1612 - - - 0.0