Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g1628 | ATGGAGGGAAAAGAAGAGGACGTGAAGCTCGGAGCGAACAAGTACTCAGAAAGACAGCCAATCGGAACATCGGCGCAGACGGACAAGGACTACAAAGAGCCTCCGCCGGCGCCGCTGTTCGAGCCCGGCGAGCTCTCGTCATGGTCCTTCTACAGAGCCGGAATCGCCGAGTTCGTAGCCACTTTCTTGTTCCTGTACATCACCATCTTGACGGTGATGGGCGTCAGCCGAGCTCCGACGAAGTGCTCCACCGTCGGCATTCAGGGCATCGCTTGGGCCTTCGGCGGCATGATCTTTGCCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATTAATCCGGCGGTGACATTCGGGCTTTTCTTGGCGAGAAAGTTGTCGCTCACCAGAGCCATATTCTACATCATAATGCAGTGTCTAGGCGCCATCTGCGGCGCTGGCGTCGTGAAGGGCTTCGAGAAGTCCATCTACGTGCAGAAGCTCGGCGGCGCCAACTTCGTCGCCTCTGGCTACACCAAGGGCAGTGGCCTCGGCGCCGAGATCATCGGCACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACTGACGCCAAGAGAAATGCCAGAGACTCTCATGTCCCTATTTTGGCTCCTCTTCCCATTGGTTTTGCTGTGTTTTTGGTTCATTTGGCCACTATTCCCATCACCGGCACCGGCATCAACCCGGCCCGGAGTCTCGGAGCTGCAATCATCTACAACAGGCAGCACGCTTGGGATGATCATTGGATTTTCTGGGTGGGACCTTTCATTGGAGCTGCTCTTGCTGCAATTTACCACCAGATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGA | 861 | 56.45 | MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITILTVMGVSRAPTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEKSIYVQKLGGANFVASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDHWIFWVGPFIGAALAAIYHQIIIRAIPFKARA | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 67736079 | 67739350 | - | Tan0022607.1 | Tan07g1628 | 759159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g1628 | 286 | ProSitePatterns | MIP family signature. | 112 | 120 | IPR022357 | - | |
Tan07g1628 | 286 | NCBIfam | MIP family channel protein | 56 | 272 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 282 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Tan07g1628 | 286 | FunFam | Probable aquaporin PIP1-2 | 37 | 286 | - | - | |
Tan07g1628 | 286 | SUPERFAMILY | Aquaporin-like | 45 | 278 | IPR023271 | - | |
Tan07g1628 | 286 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Tan07g1628 | 286 | Gene3D | Glycerol uptake facilitator protein. | 37 | 284 | IPR023271 | - | |
Tan07g1628 | 286 | Pfam | Major intrinsic protein | 44 | 273 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | CDD | MIP | 52 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PRINTS | Major intrinsic protein family signature | 180 | 198 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PRINTS | Major intrinsic protein family signature | 131 | 150 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PRINTS | Major intrinsic protein family signature | 256 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PRINTS | Major intrinsic protein family signature | 52 | 71 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PRINTS | Major intrinsic protein family signature | 94 | 118 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan07g1628 | 286 | PRINTS | Major intrinsic protein family signature | 216 | 238 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0184 | Tan-Chr4:1492177 | Tan07g1628 | Tan-Chr7:67736079 | 1.20E-139 | dispersed | |
Tan04g0185 | Tan-Chr4:1499137 | Tan07g1628 | Tan-Chr7:67736079 | 2.30E-140 | dispersed | |
Tan07g1628 | Tan-Chr7:67736079 | Tan11g0853 | Tan-Chr11:7002074 | 2.60E-104 | dispersed | |
Tan07g1628 | Tan-Chr7:67736079 | Tan05g0256 | Tan-Chr5:1952043 | 6.70E-108 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g1628 | K09872 | - | csv:101217440 | 553.518 |