Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1628 ATGGAGGGAAAAGAAGAGGACGTGAAGCTCGGAGCGAACAAGTACTCAGAAAGACAGCCAATCGGAACATCGGCGCAGACGGACAAGGACTACAAAGAGCCTCCGCCGGCGCCGCTGTTCGAGCCCGGCGAGCTCTCGTCATGGTCCTTCTACAGAGCCGGAATCGCCGAGTTCGTAGCCACTTTCTTGTTCCTGTACATCACCATCTTGACGGTGATGGGCGTCAGCCGAGCTCCGACGAAGTGCTCCACCGTCGGCATTCAGGGCATCGCTTGGGCCTTCGGCGGCATGATCTTTGCCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATTAATCCGGCGGTGACATTCGGGCTTTTCTTGGCGAGAAAGTTGTCGCTCACCAGAGCCATATTCTACATCATAATGCAGTGTCTAGGCGCCATCTGCGGCGCTGGCGTCGTGAAGGGCTTCGAGAAGTCCATCTACGTGCAGAAGCTCGGCGGCGCCAACTTCGTCGCCTCTGGCTACACCAAGGGCAGTGGCCTCGGCGCCGAGATCATCGGCACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACTGACGCCAAGAGAAATGCCAGAGACTCTCATGTCCCTATTTTGGCTCCTCTTCCCATTGGTTTTGCTGTGTTTTTGGTTCATTTGGCCACTATTCCCATCACCGGCACCGGCATCAACCCGGCCCGGAGTCTCGGAGCTGCAATCATCTACAACAGGCAGCACGCTTGGGATGATCATTGGATTTTCTGGGTGGGACCTTTCATTGGAGCTGCTCTTGCTGCAATTTACCACCAGATCATCATCAGAGCCATTCCATTCAAGGCCAGAGCTTGA 861 56.45 MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITILTVMGVSRAPTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEKSIYVQKLGGANFVASGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDHWIFWVGPFIGAALAAIYHQIIIRAIPFKARA 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67736079 67739350 - Tan0022607.1 Tan07g1628 759159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1628 286 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Tan07g1628 286 NCBIfam MIP family channel protein 56 272 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 282 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
Tan07g1628 286 FunFam Probable aquaporin PIP1-2 37 286 - -
Tan07g1628 286 SUPERFAMILY Aquaporin-like 45 278 IPR023271 -
Tan07g1628 286 MobiDBLite consensus disorder prediction 1 34 - -
Tan07g1628 286 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Tan07g1628 286 Pfam Major intrinsic protein 44 273 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 CDD MIP 52 276 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1628 286 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0184 Tan-Chr4:1492177 Tan07g1628 Tan-Chr7:67736079 1.20E-139 dispersed
Tan04g0185 Tan-Chr4:1499137 Tan07g1628 Tan-Chr7:67736079 2.30E-140 dispersed
Tan07g1628 Tan-Chr7:67736079 Tan11g0853 Tan-Chr11:7002074 2.60E-104 dispersed
Tan07g1628 Tan-Chr7:67736079 Tan05g0256 Tan-Chr5:1952043 6.70E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1628 K09872 - csv:101217440 553.518