Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1659 ATGGATGGGAGGGAAGGCATGGCATTGTCTGGTGGCTCTGCTTCTTATTACATACATAGGGGAGGAGGGGTTGGGGGCTCTGGATCAGGGCTGCCATCGGCTGGATCACATGCCTCCCCTGTATTCCGGCCAATGGCTAACCAGGGTGTTTTGTCTCACTCAAATCTCAGAGGCAACTCAGTTGGATCGACGTATGCTGTTGAGCCATCGCATTCCAATTATCTTCGTGGAATAAGTATGAATATCTCACCTGGAGTGAACTCTGGTGAACCTGTAAAGAAGAAGAGGGGGAGGCCAAGGAAATATGCTCCAGATGGGCAGGTCTCATTGGGTCTGTCTCCCATGTCTGCTGGTTCTAAGCTCACTCCGGGGTCGAATTTGTCAACCCCAAGACGACGAAGAGGGCGACCGCCTGGTTCTGGAAGGAAACAACAATTAGCTCTCCTTGGTGAGTGGATGAACAATTCAGCTGGACTAGCTTTTGCCCCACATGTCGTTCACGTTGGAGCTGGAGAAGATATTGTAGCAAAAGTATTGTCATTCGCACAGCAGAGGCCAAGGGCTGTTTGCATCTTGTCAGGCAATGGTACTGTTTCTTCCGTAACACTACGTCAGCCTGCATCTACTGGCGTGAGCGTCACATATGAGGGTCATTTCCAGATATTGTGCTTGTCTGGTTCTTACTTGGTAGCTGAAGATGGTGGTCCTCGAAACCGGACAGGCGGTATTAGTGTTTCTCTTTCTAGTCCTGATGGGCATGTCATTGGTGGTGGCGTTGCCGTTCTTATGGCAGCTGGCCCTGTTCAGGTAGTTGTATGTAGTTTTGTTTATGGTGCAAAGATCAAGAACAAGCAGGTGGCTGGTCCGAGAAGCAATGATGATTCTGAAAATGACCACCATGATAATTTGGTTTCGCCGACGAGTGCCCCATCTGCCCAAACCTACAATCCCTCTGCTATTGGTGTTTGGCCCGGTTCCCGTTCGGTCGATGTGAGAAACCCCCATACTGGAATCGACTTGACGCGGGGATGA 1032 50.29 MDGREGMALSGGSASYYIHRGGGVGGSGSGLPSAGSHASPVFRPMANQGVLSHSNLRGNSVGSTYAVEPSHSNYLRGISMNISPGVNSGEPVKKKRGRPRKYAPDGQVSLGLSPMSAGSKLTPGSNLSTPRRRRGRPPGSGRKQQLALLGEWMNNSAGLAFAPHVVHVGAGEDIVAKVLSFAQQRPRAVCILSGNGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGGPRNRTGGISVSLSSPDGHVIGGGVAVLMAAGPVQVVVCSFVYGAKIKNKQVAGPRSNDDSENDHHDNLVSPTSAPSAQTYNPSAIGVWPGSRSVDVRNPHTGIDLTRG 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67954370 67962740 + Tan0018616.1 Tan07g1659 759190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1659 343 MobiDBLite consensus disorder prediction 287 301 - -
Tan07g1659 343 MobiDBLite consensus disorder prediction 78 143 - -
Tan07g1659 343 CDD DUF296 163 275 IPR005175 -
Tan07g1659 343 ProSiteProfiles PPC domain profile profile. 158 299 IPR005175 -
Tan07g1659 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 72 305 IPR039605 GO:0003680(InterPro)
Tan07g1659 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 276 - -
Tan07g1659 343 MobiDBLite consensus disorder prediction 302 321 - -
Tan07g1659 343 MobiDBLite consensus disorder prediction 286 343 - -
Tan07g1659 343 MobiDBLite consensus disorder prediction 112 129 - -
Tan07g1659 343 Gene3D - 163 287 - -
Tan07g1659 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0164 Tan-Chr5:1312912 Tan07g1659 Tan-Chr7:67954370 6.30E-33 dispersed
Tan06g2054 Tan-Chr6:66875193 Tan07g1659 Tan-Chr7:67954370 1.00E-78 dispersed
Tan06g2055 Tan-Chr6:66875193 Tan07g1659 Tan-Chr7:67954370 1.00E-78 dispersed
Tan07g1659 Tan-Chr7:67954370 Tan10g0352 Tan-Chr10:2874910 1.20E-50 dispersed
Tan07g1659 Tan-Chr7:67954370 Tan07g1762 Tan-Chr7:69191597 1.10E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1659 - - - 0.0