Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1662 ATGCTGAAGTTGCCGCGGCGGAAACGCTCGCCGGCGGCAAAAAATCAGGAGAATGCGAATAATGCAGCGATTATTGACGACGACGAAACGGCGGCGGAGACGAGACCAGCGGCAGCGGCGAAGGCGGTGCTCTGTGTTTCCGGCATGAGTTGCTCTGCTTGCGCCGTTTCAGTAGAGAATTCCATCAAACACCTTCCAGGCATTCTCGATGCCGCCGTCGATTTCTTGAACGATAGGGCTCAAATCCGCTATCTCCCTAATCTCATCGATGAAGAGTCAATACTTAAAGCAATCGAAAATGCTGGGTTTCAAGCTACAATATCGAAGGACGGGACCGATCTTCGATCAAGAGAAGTATGTCGAATCCGAATAAATGGGATGGGCTGCAATTCTTGCTCTTCCATGGTAGAGTCAGTTTTGGAAGAAATGTATGGAGTCCAAAAGGCTCACATTGCGCTGTTAAAAGAGGAAGCAGAAGTTCACTATGATCCAAAGGTTGTTAACTCCAGTCAGTTCATTGTAGCCATACAAGATATTGGCTTTGATGCCTTACTTATAACCATTGGTGAACACATTAGCAAGATTGAGCTCAAGATTGATGGTATGCATAACGAAAACTCAACGACAAAAGTTCAAGAATCGCTCGAATCGGTCCCAGGAATCGAAGATATCAATATAGATGTGGCATTGAGCAAAGTTACCATATCTTATAGGCCTGATATAACAGGACCTAGAACTTTCATTGAAGTCATCGAGTCGATCAAATCCGAGCATTTCAAGGCAACGATATATCCCGAAGAAGCGGGACGAGAAACTCGTAAGGGGAAAGAAATTAAACAGCATTACAAGTACTTCTTATGGAGCTCTGCTCTTTCTATTCCTGTTTTTTTAACATCCATGGTCTTCATGTATATACCTGGAATCAAGCAGACTTTAGATATCAAAGTAGTCAATATGATGAATGTTGGACATATTATCCGGTGGAATTTTTCGACTCCGGTGCAGTTCATCATAGGTTGGAGATTCTATGTCGGATCGTACAAAGCGTTGCGCCGTGGTTCTGCCAACATGGATGTATTGATTACATTGGGAACAAATGCAGCCTATTTCTATTCTGTCTATATAGTGTTAAGAGCAGCTACATCCCCTGCTTTCAATGGAACTGATTTCTTTGAGACTAGTTCAATGTTAATCACATTCATTCTACTTGGTAAGTATTTGGAGGTTCTAGCAAAAGGAAAGACCTCTGAGGCCATTGCCAAGCTTAAGCACTTGGCGCCTGAGACAGCGACGCTCTTGACTCTAGATGGCCACGGAAATGTGATCGGCGAAGTGGAAATCAGTAGTGAGTTGATTCAAAAGAATGATGTTATTAAGATTACGCCAGGTGCGAAAGTAGCTTCCGATGGTCTTGTCGTATGGGGTGAAAGTCATGTCAATGAGAGTATGATCACCGGAGAAGCGAAACCAGTAGCGAAAAGAACGGGCGACAAAGTGATAGGAGGAACTGTGAATGAGAATGGGGTATTACATATAAAGGCAACACATGTCGGATCGGAGAGTTCTTTAGCACAAATCGTTCGACTCGTTGAATCGTCTCAGTTGGCGAAAGCTCCTATTCAGAAATTTGCAGACCACATCTCCAAGTATTTTGTGCCTCTGGTAATTTTACTCTCTTTTCTCACTTGGATTGCCTGGTTTTTAGCTGGAAAGTTGCATCTCTATCCTAAGTCCTGGTTGCCTTCTTCAATGGACAGTTTTGAGCTTGCACTCCAATTTGGGATTTCTGTTATGGTCATAGCTTGCCCTTGTGCCCTCGGCCTCGCCACCCCGACTGCTGTGATGGTCGGTACCGGTGTCGGTGCATCTCAAGGTGTACTAATAAAAGGCGGTCAAGCATTAGAATTTGCACATAAGGTGAGCAGCATTGTGTTTGATAAGACAGGAACTCTAACAATTGGAAAGCCAGTGGTTGTAAATGTAAAACTTATGAACAATGTAGTACTTGAAGAACTGCTTGAACTCACTGCTGCAACTGAGGTGAACAGTGAGCATCCAGTAGCCAAGGCCATTGTTGAATATGCTAAGCAATTCAAGGAAGAACAGAACCCCATTTGGCCAGAAGCTCAAGAATTCATATCCATTCCTGGCCATGGAGTAGAAGCCACTGTAAGGAACAAGAAAGTAAAGGTTGGAAACAAGAGCTTGATGATGAACAATGACATAGAAATTCCGGGGGAAGCGGAGAGCTTCCTCGTCGACGCAGAAGGTATGGTGCAAACTGCGATTTTGGTGGCTGTAGATCAAACGGTGTCGGGAGTTATCGCGGTGTCCGATCCATTGAAACCGGGTGCCAAAGAAGTCATCTCCATTCTTAAGTCTATGGAAGTGAAGAGCATCATGGTAACAGGTGACAATTGGGGAACTGCAAATTCCATTGCCAAAGAAGTTGGAATTGAAACAGTCATTGCAGAGGCCAAGCCTGAGCAGAAAGCAGAGGAAGTAAAGAATCTTCAGACGGCGGGACACACGGTGGCGATGGTGGGAGACGGGATCAACGACTCGCCTGCTCTTGTAGCGGCCGACGTCGGGATGGCGATCGGAGCTGGCACAGACATTGCCATTGAAGCAGCAGACATTGTTCTAATGAAAAATGACTTGCAAGATGTTATAACTGCAATTCATCTTTCAAGAAAAACCTTTGCTAGAATTCGCCTGAATTACATTTGGGCTCTCGGTTATAATCTTCTTGCCATTCCGATAGCCGCAGGCGTCCTGTTCCCTTCGACTCGATTTCGGCTACCGCCGTGGATCGCCGGAGCTGCCATGGCAGCTTCTTCTGTTAGTGTGGTATGCAGTTCTTTGATGTTGAAGAAGTACCAGAGACCTAAGAAGCTAGATGAAGTTGAGATTCAAATGAAAGGAATAGTGGTTGAATGA 2940 44.93 MLKLPRRKRSPAAKNQENANNAAIIDDDETAAETRPAAAAKAVLCVSGMSCSACAVSVENSIKHLPGILDAAVDFLNDRAQIRYLPNLIDEESILKAIENAGFQATISKDGTDLRSREVCRIRINGMGCNSCSSMVESVLEEMYGVQKAHIALLKEEAEVHYDPKVVNSSQFIVAIQDIGFDALLITIGEHISKIELKIDGMHNENSTTKVQESLESVPGIEDINIDVALSKVTISYRPDITGPRTFIEVIESIKSEHFKATIYPEEAGRETRKGKEIKQHYKYFLWSSALSIPVFLTSMVFMYIPGIKQTLDIKVVNMMNVGHIIRWNFSTPVQFIIGWRFYVGSYKALRRGSANMDVLITLGTNAAYFYSVYIVLRAATSPAFNGTDFFETSSMLITFILLGKYLEVLAKGKTSEAIAKLKHLAPETATLLTLDGHGNVIGEVEISSELIQKNDVIKITPGAKVASDGLVVWGESHVNESMITGEAKPVAKRTGDKVIGGTVNENGVLHIKATHVGSESSLAQIVRLVESSQLAKAPIQKFADHISKYFVPLVILLSFLTWIAWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALEFAHKVSSIVFDKTGTLTIGKPVVVNVKLMNNVVLEELLELTAATEVNSEHPVAKAIVEYAKQFKEEQNPIWPEAQEFISIPGHGVEATVRNKKVKVGNKSLMMNNDIEIPGEAESFLVDAEGMVQTAILVAVDQTVSGVIAVSDPLKPGAKEVISILKSMEVKSIMVTGDNWGTANSIAKEVGIETVIAEAKPEQKAEEVKNLQTAGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRKTFARIRLNYIWALGYNLLAIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYQRPKKLDEVEIQMKGIVVE 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 67982549 67990115 - Tan0010111.1 Tan07g1662 759193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1662 979 ProSitePatterns Heavy-metal-associated domain. 46 75 IPR017969 GO:0046872(InterPro)
Tan07g1662 979 SUPERFAMILY Calcium ATPase, transmembrane domain M 389 927 IPR023298 -
Tan07g1662 979 Pfam E1-E2 ATPase 425 622 - -
Tan07g1662 979 SUPERFAMILY HAD-like 643 954 IPR036412 -
Tan07g1662 979 PRINTS P-type cation-transporting ATPase superfamily signature 871 883 - -
Tan07g1662 979 PRINTS P-type cation-transporting ATPase superfamily signature 795 805 - -
Tan07g1662 979 PRINTS P-type cation-transporting ATPase superfamily signature 848 867 - -
Tan07g1662 979 PRINTS P-type cation-transporting ATPase superfamily signature 480 494 - -
Tan07g1662 979 PRINTS P-type cation-transporting ATPase superfamily signature 644 658 - -
Tan07g1662 979 PRINTS P-type cation-transporting ATPase superfamily signature 773 784 - -
Tan07g1662 979 FunFam Probable copper-transporting ATPase HMA5 751 905 - -
Tan07g1662 979 Gene3D - 118 188 - -
Tan07g1662 979 CDD HMA 46 106 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 Gene3D - 651 728 IPR023299 GO:0000166(InterPro)
Tan07g1662 979 Gene3D - 729 779 IPR023299 GO:0000166(InterPro)
Tan07g1662 979 Gene3D - 39 109 - -
Tan07g1662 979 SUPERFAMILY Calcium ATPase, transduction domain A 444 530 IPR008250 -
Tan07g1662 979 CDD P-type_ATPase_Cu-like 285 944 - -
Tan07g1662 979 NCBIfam heavy metal translocating P-type ATPase 357 957 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Tan07g1662 979 ProSiteProfiles Heavy-metal-associated domain profile. 193 259 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 SFLD p-type atpase 626 900 IPR044492 -
Tan07g1662 979 Gene3D - 611 905 IPR023214 -
Tan07g1662 979 ProSiteProfiles Heavy-metal-associated domain profile. 118 184 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 FunFam Copper-transporting ATPase HMA5 39 110 - -
Tan07g1662 979 SUPERFAMILY HMA, heavy metal-associated domain 39 109 IPR036163 GO:0046872(InterPro)
Tan07g1662 979 ProSiteProfiles Heavy-metal-associated domain profile. 40 106 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 CDD HMA 196 262 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 CDD HMA 122 183 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 PRINTS Copper-transporting ATPase 1 signature 142 163 - -
Tan07g1662 979 PRINTS Copper-transporting ATPase 1 signature 41 66 - -
Tan07g1662 979 PRINTS Copper-transporting ATPase 1 signature 96 116 - -
Tan07g1662 979 PRINTS Copper-transporting ATPase 1 signature 67 90 - -
Tan07g1662 979 FunFam Copper-transporting ATPase 1, putative 412 534 - -
Tan07g1662 979 NCBIfam HAD-IC family P-type ATPase 397 930 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan07g1662 979 SFLD C1.7: P-type atpase like 626 900 - -
Tan07g1662 979 ProSitePatterns Heavy-metal-associated domain. 124 154 IPR017969 GO:0046872(InterPro)
Tan07g1662 979 ProSitePatterns E1-E2 ATPases phosphorylation site. 646 652 IPR018303 -
Tan07g1662 979 NCBIfam copper ion binding protein 122 183 IPR006122 GO:0005507(InterPro)
Tan07g1662 979 Pfam Heavy-metal-associated domain 197 255 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 Pfam Heavy-metal-associated domain 46 103 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 Pfam Heavy-metal-associated domain 122 182 IPR006121 GO:0046872(InterPro)
Tan07g1662 979 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 24 973 - -
Tan07g1662 979 Pfam haloacid dehalogenase-like hydrolase 643 862 - -
Tan07g1662 979 SUPERFAMILY HMA, heavy metal-associated domain 119 189 IPR036163 GO:0046872(InterPro)
Tan07g1662 979 MobiDBLite consensus disorder prediction 1 27 - -
Tan07g1662 979 SUPERFAMILY HMA, heavy metal-associated domain 188 255 IPR036163 GO:0046872(InterPro)
Tan07g1662 979 Gene3D - 194 263 - -
Tan07g1662 979 FunFam ATPase copper transporting beta 115 187 - -
Tan07g1662 979 Gene3D - 412 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3474 Tan-Chr1:100015690 Tan07g1662 Tan-Chr7:67982549 1.80E-92 dispersed
Tan03g0595 Tan-Chr3:60844816 Tan07g1662 Tan-Chr7:67982549 0.00E+00 dispersed
Tan05g0024 Tan-Chr5:324037 Tan07g1662 Tan-Chr7:67982549 9.30E-229 dispersed
Tan05g1626 Tan-Chr5:41665654 Tan07g1662 Tan-Chr7:67982549 1.70E-244 dispersed
Tan07g1662 Tan-Chr7:67982549 Tan09g1717 Tan-Chr9:68720537 4.40E-66 dispersed
Tan07g1662 Tan-Chr7:67982549 Tan09g1716 Tan-Chr9:68720537 4.40E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1662 K17686 - csv:101220448 1663.28