Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1704 ATGGCTGACCAAAAGCTTCCAATTAATGAGAGCCAAATAGGCCAATCTCTTCCTCTATCAAATTCAAAACCAATTCCCATTGACCCTTTTGTTTCTTCTTCTGTCCCCACATGCCAAAATCCAATTCCAAATCCAAATCCAAATCCAAATCCAAAATCCCAAGAAGGAAAGCAACTTAATTTTATTCAAAAACTACCACCACCTCCTCCTCCATCATCATCCATGGCTTCTTTAACTTCTTCTTCCTCTTCTCCATCATCAACCAAGAAGCATTCCTTGTATAGAGGAATCCGGTGCCGGAGCGGCAAATGGGTGTCGGAGATCCGGGAGCCACGTAAGACGACGCGTATATGGCTCGGGACGTTTCCGACTGCCGAGATGGCTGCCGCCGCCTACGACGTCGCCGCTCTCGCCCTTCGAGGTGGCGACGCTGTCCTCAACTTTCCCTCCTCCATTGGCTCCTACCCTGTTCCCGCCTCGGCCTCTCCGGTCGATATACGTACTGCTGCCTCCACTGCCGCCGCCGCCGCCGCTAACGCTGCCAATGCGTTGAAGAAAGCTGAAGCTTGTAATAGTAACATGGAAGATGTTACGATGGGCGCGATAGAAGATAGTGGTAATACGGCGTCGTTGGGGATAGAGGAGTTTGTGGATGAGGAGGAGATTTTTGGGATGCCGAGTTTGCTGGCGGATATGGCGGAGGGGATGATGGTGTCGCCGCCGAGAATGAACTCACCGCCGCCGTCCGATGACTCGATGGAAAATTCGGATGGAACGGAAAGTTTATGGAGCTACTTTTGA 801 51.19 MADQKLPINESQIGQSLPLSNSKPIPIDPFVSSSVPTCQNPIPNPNPNPNPKSQEGKQLNFIQKLPPPPPPSSSMASLTSSSSSPSSTKKHSLYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTAEMAAAAYDVAALALRGGDAVLNFPSSIGSYPVPASASPVDIRTAASTAAAAAANAANALKKAEACNSNMEDVTMGAIEDSGNTASLGIEEFVDEEEIFGMPSLLADMAEGMMVSPPRMNSPPPSDDSMENSDGTESLWSYF 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68393095 68394159 + Tan0019188.1 Tan07g1704 759235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1704 266 FunFam Ethylene-responsive transcription factor 2 92 150 - -
Tan07g1704 266 MobiDBLite consensus disorder prediction 75 91 - -
Tan07g1704 266 SUPERFAMILY DNA-binding domain 92 151 IPR016177 GO:0003677(InterPro)
Tan07g1704 266 CDD AP2 92 151 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1704 266 MobiDBLite consensus disorder prediction 1 93 - -
Tan07g1704 266 Pfam AP2 domain 93 141 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1704 266 MobiDBLite consensus disorder prediction 248 266 - -
Tan07g1704 266 Gene3D AP2/ERF domain 93 151 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1704 266 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 87 265 IPR045277 GO:0003700(InterPro)
Tan07g1704 266 ProSiteProfiles AP2/ERF domain profile. 93 149 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1704 266 SMART rav1_2 93 157 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1704 266 MobiDBLite consensus disorder prediction 238 266 - -
Tan07g1704 266 MobiDBLite consensus disorder prediction 8 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1704 Tan-Chr7:68393095 Tan08g1763 Tan-Chr8:69611163 1.40E-35 dispersed
Tan07g1704 Tan-Chr7:68393095 Tan07g1705 Tan-Chr7:68415741 4.40E-29 tandem
Tan01g1917 Tan-Chr1:20650398 Tan07g1704 Tan-Chr7:68393095 8.30E-50 transposed
Tan01g0295 Tan-Chr1:2506650 Tan07g1704 Tan-Chr7:68393095 5.10E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27987 PF00847 AP2 9.90E-11 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1704 - - - 0.0