Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1705 ATGGATTTCTTCGGCCAATTTTCTGATCCTATTCCTTATTATGGTAATTATAATTACAAGTCCGAATCATCCTCGACACTGTCGGACGCCGGAACGCCGCCGCACTTTGTGGCTAACTCCGACGAGGAAGTGATACTGGCGTCGAACCGGCCGAAGCGACGGGCCGGTCGGCGGGTTTTTAAGGAGACGAGGCATCCGGTTTACAGAGGGGTGCGGCGGAGGAATAACGACAAATGGGTTTGTGAGCTGAGGGAGCCGAATAAGAAGACGAGGATTTGGCTCGGGACTTACCCGACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCGCTCGCGTTGAGAGGGAAATTGGCTTGTCTCAATTTCGCCGACTCTGCTTGGCGGTTTCCGATTCCGGCGAGTGATGACCCGTCTGTGATCAGGGAGGCGGCGGCGAGAGCGGCGAATGAGTGTAAGGATGAAGAGTGCAATGTGGGTCGGGAAGAGGACGACGTCGTTTTGAGTCAGCCCACGGCGGAGCCTGATCGGCTGGAGTACGTCGACGATGAGGCTTTGTCGAATATGCCCATGTTGCTTTCCAGCATGGCAGAGGGGCTTCTTCTTTCTCCTCCTCATTTTTGTGTACGTGATGACGTGGAGTGGGATGACGTGGCTATGAGTGATGACTTGTCATTGTGGAGCTTTTAG 690 55.22 MDFFGQFSDPIPYYGNYNYKSESSSTLSDAGTPPHFVANSDEEVILASNRPKRRAGRRVFKETRHPVYRGVRRRNNDKWVCELREPNKKTRIWLGTYPTAEMAARAHDVAALALRGKLACLNFADSAWRFPIPASDDPSVIREAAARAANECKDEECNVGREEDDVVLSQPTAEPDRLEYVDDEALSNMPMLLSSMAEGLLLSPPHFCVRDDVEWDDVAMSDDLSLWSF 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68415741 68416754 + Tan0018986.1 Tan07g1705 759236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1705 229 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 24 229 IPR045277 GO:0003700(InterPro)
Tan07g1705 229 FunFam Ethylene-responsive transcription factor 2 66 125 - -
Tan07g1705 229 Pfam AP2 domain 66 116 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 SMART rav1_2 67 130 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 CDD AP2 68 126 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1705 229 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0294 Tan-Chr7:6023525 Tan07g1705 Tan-Chr7:68415741 9.00E-51 dispersed
Tan07g1705 Tan-Chr7:68415741 Tan08g1763 Tan-Chr8:69611163 8.20E-32 dispersed
Tan07g1704 Tan-Chr7:68393095 Tan07g1705 Tan-Chr7:68415741 4.40E-29 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27988 PF00847 AP2 1.60E-14 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1705 - - - 0.0