Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1720 ATGCAAGAACCTGGGTTGGGAATGATGACGACTGCTGGTGGGTCTAGTGGTGCCCTTAGCGGCGACGTTTCGGTCTCCGGCGAGGGGGTTCACAACGGCCAACTCAAGGCGGAGATTGCTACTCATCCGCTTTATGAGCAGCTTTTAGCGGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCTCAGTTGGCTCAATCGCACCATGTTTTGCGCTCTTATGCTTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCATGAGCGCCAAGAACTCGACAATTTTCTGGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGAGCAGCTTCAGCAACATGTGAGAGTCCATGCAGTGGAAGCTGTTATGGCTTGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGAGTGAGCCTTGGTGAAGGAACCGGTGCAACGATGTCGGACGACGACGACGATGTTCCGATCGACTTTTCGCTTGATCAATCTGGTGCCGACGCTCACGACATGATGGGGTTCGGGCCGCTGCTTCCGACCGAATCCGAAAGGTCATTGATGGAGAGGGTTCGGCAGGAACTGAAGATTGAGCTAAAACAGGGTTTCAAGTCAAGAATTGAAGATGTGAGAGAAGAGATATTAAGAAAAAGAAGGGCAGGGAAGTTACCTGGTGATACAACCACAGTTTTGAAGAACTGGTGGCAGCAACATTCCAAGTGGCCTTACCCAACTGTAAGTTAA 771 49.55 MQEPGLGMMTTAGGSSGALSGDVSVSGEGVHNGQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPMIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDDDDVPIDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTVS 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68538804 68543570 - Tan0010256.2 Tan07g1720 759251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1720 256 Pfam KNOX1 domain 35 76 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1720 256 Pfam KNOX2 domain 96 146 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1720 256 SMART KNOX1_2 33 77 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1720 256 ProSiteProfiles ELK domain profile. 203 223 IPR005539 GO:0003677(InterPro)
Tan07g1720 256 Gene3D - 196 256 - -
Tan07g1720 256 SMART KNOX2_2 92 147 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1720 256 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 48 254 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1719 Tan-Chr7:68538804 Tan07g1720 Tan-Chr7:68538804 3.70E-141 tandem
Tan07g1720 Tan-Chr7:68538804 Tan07g1721 Tan-Chr7:68538804 2.80E-113 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1720 - - - 0.0