Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1721 ATGCAAGAACCTGGGTTGGGAATGATGACGACTGCTGGTGGGTCTAGTGGTGCCCTTAGCGGCGACGTTTCGGTCTCCGGCGAGGGGGTTCACAACGGCCAACTCAAGGCGGAGATTGCTACTCATCCGCTTTATGAGCAGCTTTTAGCGGCACATGTTGCTTGTCTTCGTGTTGCTACTCCGATTGATCAGCTTCCGATGATCGATGCTCAGTTGGCTCAATCGCACCATGTTTTGCGCTCTTATGCTTCTCAGCAGCATCACCAACATGCCCATTCCTTATCGCCTCATGAGCGCCAAGAACTCGACAATTTTCTGGCGCAGTATATGATCGTTTTGTGCTCTTTTAAAGAGCAGCTTCAGCAACATGTGAGAGTCCATGCAGTGGAAGCTGTTATGGCTTGCCGTGAAATTGAAAATACTCTACAAGCTCTTACAGGAGTGAGCCTTGGTGAAGGAACCGGTGCAACGATGTCGGACGACGACGACGATGTTCCGATCGACTTTTCGCTTGATCAATCTGGTGCCGACGCTCACGACATGATGGGGTTCGGGCCGCTGCTTCCGACCGAATCCGAAAGGTCATTGATGGAGAGGGTTCGGCAGGAACTGAAGATTGAGCTAAAACAGGTTCCTTTTATATGGTCTCCATTGCAAATTAAGATTTCTATTTTGTCGGCCTTGAAATGA 690 49.86 MQEPGLGMMTTAGGSSGALSGDVSVSGEGVHNGQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPMIDAQLAQSHHVLRSYASQQHHQHAHSLSPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDDDDVPIDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQVPFIWSPLQIKISILSALK 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 68538804 68543570 - Tan0010256.3 Tan07g1721 759252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1721 229 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 30 123 IPR053363 -
Tan07g1721 229 Pfam KNOX1 domain 35 76 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1721 229 SMART KNOX1_2 33 77 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1721 229 SMART KNOX2_2 92 147 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Tan07g1721 229 Pfam KNOX2 domain 96 146 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1719 Tan-Chr7:68538804 Tan07g1721 Tan-Chr7:68538804 3.30E-113 dispersed
Tan07g1720 Tan-Chr7:68538804 Tan07g1721 Tan-Chr7:68538804 2.80E-113 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1721 - - - 0.0