Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan07g1754 | ATGGATGCCCACTCTCTTCCACCTCCTTTTCACACTCGAGATTTCCATCTCCAACAACAACAATTTCACCACAACAATAATTCCGAAGAAGAACATAGCGCCACCACCAGCCGTTTGAAACGGGATCGTGACGATGACGATCTTAACAACAGCGGCGGAGACGGCGCTGCTGCTGATGGTGAAATTACTCGACGACCCAGAGGAAGACCCGCCGGATCCAAGAACAAACCCAAGCCACCCATTATTATTACTCGCGACAGTGCTAATGCCCTTCGTACTCACGTCATCGAAGTCACCGACGGCTGCGACATCGTCGACAGTGTCGCCACCTTCGCCCGCCGCCGTCAGCGCGGCGTTTGCATTATGAGTGGCACTGGTACCGTCACCAACGTCACTCTCCGCCAGCCGGCTTCCCCTGGTGCAATTGTCAACTTACACGGCCGCTTTGAGATCTTATCCCTTGCCGGTTCCTTCCTCCCTCCCCCGGCTCCTCCGGCTGCTACCAGCTTGACCATTTACCTAGCCGGCGGTCAGGGTCAGGTCGTCGGCGGTAGCGTCGTCGGTACTTTAATCGCCTCTGGCCCCGTCGTCATCATGGCCGCCTCCTTTAGCAACGCTGCTTATGAACGGCTGCCGTTGGAAGACGACGACCAGCCGCCGCTTCAGGGCGGCGGCGGAATTGGATCTCCCGATGAAGTTGGTCAGTCCCAACCGGCGCAAACGGCGCATCATCAACAGCAGCAACAACAACAGCAACTCCTCGCCGACGGAAATGCGCCGTTATTTCACGATCATGAGGTGATCAAAGTCAAAGAAAGGCCTTCAACATGTGGAAAGTCAACTCAAAACCAGTGGATTAAGTTAAGAGAAGGAAAAAAGGTAATTAGGGGTTTGAAGAAGAAGAAGAAGAAGAGTTTGTGTTTGTTTTAA | 930 | 53.87 | MDAHSLPPPFHTRDFHLQQQQFHHNNNSEEEHSATTSRLKRDRDDDDLNNSGGDGAAADGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIVDSVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVNLHGRFEILSLAGSFLPPPAPPAATSLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLEDDDQPPLQGGGGIGSPDEVGQSQPAQTAHHQQQQQQQQLLADGNAPLFHDHEVIKVKERPSTCGKSTQNQWIKLREGKKVIRGLKKKKKKSLCLF | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 69092337 | 69094228 | - | Tan0005259.1 | Tan07g1754 | 759285 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan07g1754 | 309 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 88 | 222 | - | - | |
| Tan07g1754 | 309 | CDD | DUF296 | 92 | 159 | IPR005175 | - | |
| Tan07g1754 | 309 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 28 | 252 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
| Tan07g1754 | 309 | MobiDBLite | consensus disorder prediction | 213 | 253 | - | - | |
| Tan07g1754 | 309 | MobiDBLite | consensus disorder prediction | 25 | 50 | - | - | |
| Tan07g1754 | 309 | FunFam | AT-hook motif nuclear-localized protein | 91 | 218 | - | - | |
| Tan07g1754 | 309 | MobiDBLite | consensus disorder prediction | 20 | 83 | - | - | |
| Tan07g1754 | 309 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 92 | 204 | IPR005175 | - | |
| Tan07g1754 | 309 | ProSiteProfiles | PPC domain profile profile. | 88 | 224 | IPR005175 | - | |
| Tan07g1754 | 309 | MobiDBLite | consensus disorder prediction | 233 | 253 | - | - | |
| Tan07g1754 | 309 | Gene3D | - | 91 | 221 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g3849 | Tan-Chr1:103244139 | Tan07g1754 | Tan-Chr7:69092337 | 5.20E-39 | dispersed | |
| Tan06g2152 | Tan-Chr6:71260477 | Tan07g1754 | Tan-Chr7:69092337 | 6.80E-65 | dispersed | |
| Tan07g1754 | Tan-Chr7:69092337 | Tan10g0346 | Tan-Chr10:2803196 | 3.40E-65 | dispersed | |
| Tan07g1754 | Tan-Chr7:69092337 | Tan07g1762 | Tan-Chr7:69191597 | 4.80E-19 | proximal | |
| Tan09g1837 | Tan-Chr9:69736639 | Tan07g1754 | Tan-Chr7:69092337 | 4.80E-63 | transposed | |
| Tan01g1972 | Tan-Chr1:21889389 | Tan07g1754 | Tan-Chr7:69092337 | 5.60E-20 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan07g1754 | - | - | - | 0.0 |