Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan07g1762 | ATGGAGGGAAGAGATGGTGGTGCAAGTAGTGGGGTTACTGTGGTGGGATCAGATGCTCCGTCGGAATACCAAATAGCTCCGAGAACCACCGATAACCCACCGCAGACCGGTGGATCAACGGCGCCGCCGCCGGCGACTCAACCAACTTCGACTCCTTCGGCCTCGGCTGCCCTGCCTACGGCAGCCTCCTCAGTTCCGGGAAAGAAGAAAAGAGGACGGCCGAGAAAATATGGACCTGATGGCTCTGTCACTATGGCTCTGTCTCCGAAGCCGATATCGTCATCGGTGCCGCCGCCGGTGATCGACTTCTCGACGGAGAAGAGGGGGAAAGTGCGGCCGGCGAGCGCTGTGAGCAAGAGCAAGTTCGAAGTGGATAATTTAGGTGACTGGGTTCCATGTTCTGTTGGTGCAAATTTTACACCTCATATCATCACTGTCAACACCGGCGAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTGTCCGCAAACGGTGTGATCTCAAGTGTCACTCTCCGTCAGCCTGACTCTTCTGGAGGAACACTAACATATGAGGGTCGCTTTGAAATACTGTCTTTGTCTGGCTCATTCATGCCTAGTGATAATGGAGGAACTAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGACGGACGTGTCGTAGGCGGTGGAGTTGCTGGTCTATTAGTAGCTGCAAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCTGGAAATCAACACGAGCAGAAACCTAAAAAGCCAAAACAAGATACTATTTCAACAGCCTCGCCAACTGCTGCCATTCCAATATCTTGCGTCGATCCTAAGTCCAACCTCTCGCCTTCCAGTTCCTTTCGAGGTGATAACTGGTCGATGCTGCCAAATGATTCAAGGAATAAGCCAACTGATATCAATGTATCCCTACCCAGTGCTTGA | 975 | 50.56 | MEGRDGGASSGVTVVGSDAPSEYQIAPRTTDNPPQTGGSTAPPPATQPTSTPSASAALPTAASSVPGKKKRGRPRKYGPDGSVTMALSPKPISSSVPPPVIDFSTEKRGKVRPASAVSKSKFEVDNLGDWVPCSVGANFTPHIITVNTGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKQDTISTASPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPNDSRNKPTDINVSLPSA | 324 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 69191597 | 69196011 | + | Tan0005525.1 | Tan07g1762 | 759293 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan07g1762 | 324 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 33 | 303 | IPR039605 | GO:0003680(InterPro) | |
| Tan07g1762 | 324 | ProSiteProfiles | PPC domain profile profile. | 136 | 278 | IPR005175 | - | |
| Tan07g1762 | 324 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 138 | 258 | - | - | |
| Tan07g1762 | 324 | FunFam | AT-hook motif nuclear-localized protein 1-like | 141 | 272 | - | - | |
| Tan07g1762 | 324 | Gene3D | - | 141 | 272 | - | - | |
| Tan07g1762 | 324 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 141 | 254 | IPR005175 | - | |
| Tan07g1762 | 324 | MobiDBLite | consensus disorder prediction | 288 | 324 | - | - | |
| Tan07g1762 | 324 | MobiDBLite | consensus disorder prediction | 257 | 324 | - | - | |
| Tan07g1762 | 324 | MobiDBLite | consensus disorder prediction | 1 | 99 | - | - | |
| Tan07g1762 | 324 | CDD | DUF296 | 140 | 231 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g1972 | Tan-Chr1:21889389 | Tan07g1762 | Tan-Chr7:69191597 | 9.00E-111 | dispersed | |
| Tan01g3426 | Tan-Chr1:98340217 | Tan07g1762 | Tan-Chr7:69191597 | 7.10E-74 | dispersed | |
| Tan07g1762 | Tan-Chr7:69191597 | Tan10g0352 | Tan-Chr10:2874910 | 1.90E-90 | dispersed | |
| Tan07g1754 | Tan-Chr7:69092337 | Tan07g1762 | Tan-Chr7:69191597 | 4.80E-19 | proximal | |
| Tan07g1762 | Tan-Chr7:69191597 | Tan07g1763 | Tan-Chr7:69191597 | 6.20E-134 | tandem | |
| Tan01g5155 | Tan-Chr1:116716138 | Tan07g1762 | Tan-Chr7:69191597 | 9.40E-56 | transposed | |
| Tan07g1659 | Tan-Chr7:67954370 | Tan07g1762 | Tan-Chr7:69191597 | 1.10E-51 | transposed | |
| Tan07g1968 | Tan-Chr7:71451940 | Tan07g1762 | Tan-Chr7:69191597 | 9.30E-46 | transposed | |
| Tan01g0351 | Tan-Chr1:3025882 | Tan07g1762 | Tan-Chr7:69191597 | 1.80E-73 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan07g1762 | - | - | - | 0.0 |