Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1804 ATGGTGAAGTTGGCTGTTGGTTCCGCCGCTGATTCGTTCAGTGTGGCCTCTCTTAAAGCTTATCTATCTGAGTTCATCGCCACTCTTCTTTTTGTCTTCGCCGGCGTCGGCTCCGCCATCGCCTATGGTAAGTTGACGTCGGATGCAGCTTTAGACCCACCCGGTCTGGTGGCCGTGGCCGTGGCTCATGCATTCGGTCTCTTTGTCGGCGTGTCGATGGCGGCGAACATCTCCGGCGGCCACCTGAACCCGGCGGTGACCTTCGGGTTGGCCATCGGCGGCAACATCACCATCTTGACCGGCTTGTTCTACTGGATCGCCCAGTTGCTTGGCTCCATTGTTGCTTGCCTCCTCCTCCAGTTCGTTACCAACGGCAAGAGCATTCCGACTCACGGTGTGGCAGCGGGATTGGGAGCCATCGAAGGCCTAGTGTTCGAGATAGTAATCACCTTCGGTCTGGTGTACACAGTTTACGCTACAGCCGCAGACCCTAAAAAGGGCTCACTTGGGACCATCGCCCCGATTGCTATTGGGTTCATTGTCGGTGCCAACATCCTGGCCGCAGGCCCATTTAGCGGTGGGTCCATGAACCCGGCCCGTTCCTTCGGCCCAGCTGTTGTCAGTGGAGACTTCTCTCAGATCTGGATCTACTGGGTCGGCCCACTTATTGGCGGTGGGCTTGCTGGGCTTATTTATGGCGACGTCTTTATTGGTTCTTATGCCTCTGTTCCAGTCTCTGCTGATTATGCTTAA 753 56.18 MVKLAVGSAADSFSVASLKAYLSEFIATLLFVFAGVGSAIAYGKLTSDAALDPPGLVAVAVAHAFGLFVGVSMAANISGGHLNPAVTFGLAIGGNITILTGLFYWIAQLLGSIVACLLLQFVTNGKSIPTHGVAAGLGAIEGLVFEIVITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLIGGGLAGLIYGDVFIGSYASVPVSADYA 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 69590827 69594478 - Tan0020885.1 Tan07g1804 759335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1804 250 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Tan07g1804 250 FunFam Probable aquaporin TIP1-1 2 249 - -
Tan07g1804 250 CDD MIP 19 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Tan07g1804 250 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 PANTHER AQUAPORIN-8 3 238 IPR034294 GO:0006833(PANTHER)|GO:0009705(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Tan07g1804 250 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan07g1804 250 SUPERFAMILY Aquaporin-like 15 240 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1125 Tan-Chr3:67392328 Tan07g1804 Tan-Chr7:69590827 6.80E-80 dispersed
Tan07g0226 Tan-Chr7:4883317 Tan07g1804 Tan-Chr7:69590827 2.70E-55 dispersed
Tan07g1804 Tan-Chr7:69590827 Tan08g1843 Tan-Chr8:70567235 9.50E-74 dispersed
Tan07g1804 Tan-Chr7:69590827 Tan06g0273 Tan-Chr6:2170720 8.50E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1804 K09873 - csv:101203925 464.151