Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1812 ATGGAATCCTTCACCGCCTCATTTTTCTTCTTCATTTCCATAATTTCCACTTTATTTCTTCTTCTATCAGCCCAAGCAATTTCTTCAACCTCTCCCCCCGCCGTCGCCGCCACCCACCGCCGGCACAAGTGGGTCGGACCGACCGGCCACCGCCTTATCAAAGTGGACGTTAACGGCTCCGGCGACTTCCTCTCCGTCCAAGCCGCCGTCGATGCAGTCCCCGATTATAACACCGTCAGCACCGTTATCCGAATCAGCCCTGGATATTACGTGGAGAAGGTGGTGGTGCCGGGGACGAAGCCGTACATAACATTTGAAGGAGGAGGAAAAGAGACGACAGTGATAGAATGGCACGACCGGGCAGGTGACCGTGGTCCCAGCGGGCAGCAGCTGCGTACTTACAGAACAGCCTCTGTGACAGTTTTCGCTAATTACTTCTCTGCCCGTAACATCAGCTTCAAGAATACAGCACCGGCGCCGATGCCCGGAATGCAAGGGTGGCAAGCGGCGGCGTTCCGTATTTCCGGCGACAAAGCCTATTTTTCCGGCTGCGGATTCTACGGCGCTCAAGATACGCTTTGTGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATTGAAGGCTCCATAGACTTTATCTTTGGAAATGGGCGTTCCATGTATAAGGATTGCGAGCTGCACTCCATTGCCACCCGGTTCGGTTCCATAGCGGCCCAAGATAGAAACTCGCTGGACGAAAAGACCGGGTTTGCTTTCGTCCGTTGCAAGGTGACCGGTTCAGGACCCGTGTACGTGGGTCGGGCCATGGGGCAGTACTCTAGAATCGTCTACGCGTACACTTACTTTGATGACGTGGTGGCCCACGGTGGATGGGATGACTGGGACCACATCAGCAACAAAAACAAGACTGTGTTTTTTGGAGTATACAAGTGCTGGGGTCCAGGAGCAAGTAGAGTAAAAAAGGGAGTATCATGGGCAAGGGAGTTGGAGTTTGAAGAGGCCCATCCATTTCTTGTGAAGAGCTTTGTCAATGGCAGGCACTGGATTGCACCTTCTGATGCTTAG 1068 53.28 MESFTASFFFFISIISTLFLLLSAQAISSTSPPAVAATHRRHKWVGPTGHRLIKVDVNGSGDFLSVQAAVDAVPDYNTVSTVIRISPGYYVEKVVVPGTKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSLDEKTGFAFVRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHISNKNKTVFFGVYKCWGPGASRVKKGVSWARELEFEEAHPFLVKSFVNGRHWIAPSDA 355
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 69675466 69680761 - Tan0008282.1 Tan07g1812 759343
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1812 355 Gene3D - 50 354 IPR012334 -
Tan07g1812 355 FunFam Pectinesterase 48 352 - -
Tan07g1812 355 SUPERFAMILY Pectin lyase-like 50 352 IPR011050 -
Tan07g1812 355 ProSitePatterns Pectinesterase signature 2. 207 216 IPR033131 -
Tan07g1812 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 18 351 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Tan07g1812 355 Pfam Pectinesterase 55 346 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3175 Tan-Chr1:85355794 Tan07g1812 Tan-Chr7:69675466 1.60E-80 dispersed
Tan07g1812 Tan-Chr7:69675466 Tan09g1204 Tan-Chr9:64334042 2.80E-87 dispersed
Tan07g1812 Tan-Chr7:69675466 Tan05g1298 Tan-Chr5:15292637 5.50E-51 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1812 - - - 0.0