Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1882 ATGTACCAGAGTACTAAAACAGAGCCGGATTTTGCTTTTCTTGAGCCAATTCGCCGCCACTTGTTGGGCGAATCGGAGGCCGCCGCCGTTCCCGGCGGCAGACCCACTCCTGTTTTCAGCCGGACTGGTAGTTTCAGTAGCTTGACCCCATGTCTTGATGACAATTGGGGCGATTTGCCTCTCAAGGAGGATGACTCTGAAGATATGCTTCTCGCCGCCGTTCTCCGGGATGCCGTCGGTGCCGGATGGGTTCCGTCCCTCAATCCGTCCTCACTCGGAAATTGCAATTTTGAATTCTCGCTGGTGAAGTCGGAGCCGGAGGTGCTTCCGGTGAGTTTTCCACCCGTACTACCGAATGTGGCGGCGAAGCCGGCAGTGGTACCGGAGAAGGGGAAACATTATAGAGGAGTGCGGCAACGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGGGACCCGGCGAAAAATGGTGCCAGAGTTTGGCTTGGAACCTATGAGACGGCGGAGGATGCGGCTCTAGCTTATGATCGGGCGGCCTACCGAATGCGAGGCTCAAGGGCTCTGCTCAATTTTCCCCTCCGTGTCAACTCCGGCGAGCCCGAACCGGTTCGAGTCACGTCGAAGCGATCTTCGCCGGAGCTCTCGTCGTCGCCGAAGCGGCGGAAGAAGGTCAGCTCCGCCGTAGAAGGTGGGGGAGTACAAGTGGAACAACAAGTGGCAAGCTTTACACATGGAGGGCAGATGTTTGTCAGCCAATGCTAA 759 57.44 MYQSTKTEPDFAFLEPIRRHLLGESEAAAVPGGRPTPVFSRTGSFSSLTPCLDDNWGDLPLKEDDSEDMLLAAVLRDAVGAGWVPSLNPSSLGNCNFEFSLVKSEPEVLPVSFPPVLPNVAAKPAVVPEKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRVTSKRSSPELSSSPKRRKKVSSAVEGGGVQVEQQVASFTHGGQMFVSQC 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 70388393 70389339 + Tan0021410.1 Tan07g1882 759413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1882 252 MobiDBLite consensus disorder prediction 198 229 - -
Tan07g1882 252 FunFam Ethylene-responsive transcription factor 2 132 192 - -
Tan07g1882 252 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677(InterPro)
Tan07g1882 252 PANTHER DNA-BINDING DOMAIN 121 220 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Tan07g1882 252 SMART rav1_2 133 197 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1882 252 Gene3D AP2/ERF domain 132 194 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1882 252 Pfam AP2 domain 133 184 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1882 252 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1882 252 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1882 252 CDD AP2 132 191 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g1882 252 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2079 Tan-Chr1:23845653 Tan07g1882 Tan-Chr7:70388393 9.50E-83 dispersed
Tan06g2418 Tan-Chr6:76662959 Tan07g1882 Tan-Chr7:70388393 6.60E-21 dispersed
Tan07g0192 Tan-Chr7:4517506 Tan07g1882 Tan-Chr7:70388393 3.30E-23 dispersed
Tan07g0193 Tan-Chr7:4528946 Tan07g1882 Tan-Chr7:70388393 2.20E-24 dispersed
Tan07g1882 Tan-Chr7:70388393 Tan10g0689 Tan-Chr10:5627998 2.40E-24 dispersed
Tan10g0016 Tan-Chr10:450745 Tan07g1882 Tan-Chr7:70388393 1.80E-21 transposed
Tan01g2077 Tan-Chr1:23785440 Tan07g1882 Tan-Chr7:70388393 1.40E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28001 PF00847 AP2 9.30E-15 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1882 K09286 - csv:101221583 402.134