Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1894 ATGGGAAAGCATGGACCTTGCTGTCACTGTGGAGTTACAAGCACTCCTCTTTGGCGTAATGGGCCTCCTGATAAACCAGTATTATGCAACGCATGTGGATCCCGATGGAGGACAAAGGGAACACTTGCAAACTATACCCCTTTGCATGCTCGAGCTGATCCTGATGAATATGACGATCACAGGGTTTCCAGGGTGAAGAGCATTTCAATAAATAAAAACAAAGAAGTGAAACTGCTAAAAAGAAAGCTGCAACAAGCAGATGGATCCATTGGGTGGACGATTCCTGATCAAAGTCAGGGTTACTATAGAGTAGTGGATGAAGACACAAGCAATAGATCCAGTTCTGGATCGGCCATATCTAATCCTGAGAGCTGTGCCCATTTTAGCAGTGTGGATGCAAGTGATTTGACAGGTCCAGCTCAGTCAATAGTGTGGGAGACCATGGTGCCTTCCAGGAAGAGGACCTGCGTGAATCGTCCAAAGCAATCCCCTGTTGAAAAACTAACTAAAGATCTATATAGTATTTTACATGAGCAGAGATCTTCCTATTTCTCCGAAGCATCCGAGGATGATCTGCTTTTCGAGAGTGAAAAACCTATGGTCTCTGTTGAGATAGGTCATGGAAGCATTCTTATTAGGCATCCAAGCTCGATAGCTCGAGAAGAGGAATCTGAAGCTAGCTCGGTCTCAGTTGATAACAAGCAATACTTGGTAAATGAGGTCTATTCCCCCCATTCTGCAACTGTTCTTGTATGTAGTGAAAACAAGGGTATGAATTTTCCACCATCTAGGATTGGAAAGATGAAGAATCCTTCTGGATCAGGGGTACAACAAGGACAAATTAAAAGGGACGATTCTCATCACGAAAGTTTACAAATTCTCGGAAGCCATAACTCGCCCTTATGTGATGTAGATATAAATGACATTATAAACTTCGGAGAGTTTGCAAAACAACTAACAAATGAAGAACAACAGCAATTAATGAAGTATCTGCCACAGGTTGATATCGCCGAACTTCCCGAGACCCTCAGGAGCATGTTTGATTGCCCCTACTTCAAGGAGAATTTAGCTTCCTTCCAACAACTGCTGAGGGAGGGTGTTTTCGATGTCTCCTTCCTCGGGACAATGACTGAAGACTGCAAGACTCTGAAAAGGCTTGTACTGTGTAACTCTTCAAAATCCAAATGGGTCGAACGATATCATCAACTGAAGAAATGTAAAAATGGTAGCAAAGGATCTTTACTTTCCAATGCCAATGCCTCGGTGTCGAGTAACTTCATGAATGTGAAGCGATTGCGCGAGAGCTACAATCAAAACGTTCCAGAGGTAAAGACTATCATGAAGAGTCCCAAAAGGTTGGTGATGAAGGAAAATAAGGATCCTGGAGAGAATGATGGGTCTTGCTTCAGTCCTAGAAGCTTATTTGCCTTGCCTCCTGATGGAAGCTCTCTCATGCTTGAATCTTTACAATTCATTGAAGAAAGTTCAGATCAAGATCTATTGCTCGATGTGCGGTCAAATAGTTCGTTTCCACAGGCCGAGCTCCTTCACCCGACCTCTCGTTCGGGTGGTAGGCAGGCCAGCACATGTAGTAGCTCAGTTCACCCAAATCTTGTTCATCACTAA 1626 43.6 MGKHGPCCHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARADPDEYDDHRVSRVKSISINKNKEVKLLKRKLQQADGSIGWTIPDQSQGYYRVVDEDTSNRSSSGSAISNPESCAHFSSVDASDLTGPAQSIVWETMVPSRKRTCVNRPKQSPVEKLTKDLYSILHEQRSSYFSEASEDDLLFESEKPMVSVEIGHGSILIRHPSSIAREEESEASSVSVDNKQYLVNEVYSPHSATVLVCSENKGMNFPPSRIGKMKNPSGSGVQQGQIKRDDSHHESLQILGSHNSPLCDVDINDIINFGEFAKQLTNEEQQQLMKYLPQVDIAELPETLRSMFDCPYFKENLASFQQLLREGVFDVSFLGTMTEDCKTLKRLVLCNSSKSKWVERYHQLKKCKNGSKGSLLSNANASVSSNFMNVKRLRESYNQNVPEVKTIMKSPKRLVMKENKDPGENDGSCFSPRSLFALPPDGSSLMLESLQFIEESSDQDLLLDVRSNSSFPQAELLHPTSRSGGRQASTCSSSVHPNLVHH 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 70486667 70493270 + Tan0004878.1 Tan07g1894 759425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1894 541 PANTHER OSJNBB0038F03.10 PROTEIN 1 372 IPR044589 -
Tan07g1894 541 SMART GATA_3 1 55 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g1894 541 MobiDBLite consensus disorder prediction 516 541 - -
Tan07g1894 541 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 297 409 IPR044867 -
Tan07g1894 541 Gene3D - 4 85 IPR013088 GO:0006355(InterPro)|GO:0008270(InterPro)
Tan07g1894 541 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 45 - -
Tan07g1894 541 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g1894 541 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g1894 541 Pfam Asx homology domain 286 369 IPR028020 -
Tan07g1894 541 Gene3D - 293 385 IPR038108 -
Tan07g1894 541 FunFam GATA transcription factor 27 3 85 - -
Tan07g1894 541 CDD ZnF_GATA 6 51 IPR000679 GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2094 Tan-Chr1:24037150 Tan07g1894 Tan-Chr7:70486667 8.90E-150 dispersed
Tan01g2093 Tan-Chr1:24037150 Tan07g1894 Tan-Chr7:70486667 2.80E-192 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28002 PF13919 ASXH 4.20E-08 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1894 - - - 0.0