Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1896 ATGGAGCTTATTTCAGTCAAATGTGGCTTTTTTGGTTGCCTGTTGCTTGTGCTCTTGCCTGTGTTGTGCTACTCTCAAGACTATTTTGTCTCCTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGGACACCATCTGGGGCTTGTGGATTTGGTGAATTTGGAAGGACTGTAAATGATGGCAATGTTGCTGCAGTTTCCTATCTCTATAGGAATGGTTCTGGTTGTGGTGCATGTTACCAGGTTAGGTGCACCAATCCAAAATATTGTAGTGATAGTGGAGCCTATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCATGAGTCCAAGAGCTTATGCAAAATTGGCACATCCAAACACAGCCTTAGAATTGTTCTCTTATGGTGTGATTGATGTAGAATTCAGAAGGGTTTCTTGCCAATACCCTAATTACAACACTGTCAAATTCAAAGTTCATGAACATAGTAGATACCCTGACTACTTGGCCATTGTCATCATCTATGTCACCGGCAAAAACGACATCACCGCCGTCGAATTATGGCAGGAGGATTACAAAGAATGGAAGGGGATGAGGAGATCTCATGGAGCTGTTTGGGACATGGCAAACCCACCAAAAGGAGACATAAAATTAAGGTTTCAAGTGAGTGGAAGTGTGGGATATGGAAGGTGGGTTGTGGCAAGCAATGCCCTCCCAAATTATTGGAGGGCAGGAATTGCCTATGACACAGATATTCACCTCTATTAA 762 43.44 MELISVKCGFFGCLLLVLLPVLCYSQDYFVSSRATYYGSPDCYGTPSGACGFGEFGRTVNDGNVAAVSYLYRNGSGCGACYQVRCTNPKYCSDSGAYVVVTDHGEGDYTDFIMSPRAYAKLAHPNTALELFSYGVIDVEFRRVSCQYPNYNTVKFKVHEHSRYPDYLAIVIIYVTGKNDITAVELWQEDYKEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSVGYGRWVVASNALPNYWRAGIAYDTDIHLY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 70499742 70502082 - Tan0021390.1 Tan07g1896 759427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1896 253 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 248 IPR007117 -
Tan07g1896 253 CDD DPBB_EXLB_N 30 145 - -
Tan07g1896 253 Gene3D - 22 145 IPR036908 -
Tan07g1896 253 Pfam Lytic transglycolase 67 139 IPR009009 -
Tan07g1896 253 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576(InterPro)
Tan07g1896 253 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576(InterPro)
Tan07g1896 253 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576(InterPro)
Tan07g1896 253 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576(InterPro)
Tan07g1896 253 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576(InterPro)
Tan07g1896 253 PANTHER EXPANSIN-B3 13 251 - -
Tan07g1896 253 Pfam Expansin C-terminal domain 153 237 IPR007117 -
Tan07g1896 253 SUPERFAMILY Barwin-like endoglucanases 15 149 IPR036908 -
Tan07g1896 253 SUPERFAMILY PHL pollen allergen 152 247 IPR036749 -
Tan07g1896 253 Gene3D - 146 249 IPR036749 -
Tan07g1896 253 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 150 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1896 Tan-Chr7:70499742 Tan07g1925 Tan-Chr7:71048553 3.70E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1896 - - - 0.0