Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1935 ATGGAGATTCTGAAGATTTTGGTGGCTGCGATATTTGGTGTGGCTTTGCATGGAATTGAATGTTTAAGCCATGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCCTTGGTCGAAGATATCGTTCGACGACAAGTCGAGATTGCTGTGTTCAAAGATCCTCGCATGGCTGCTTCACTTCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGTGATGCATCAGTTCTTCTAGACAGTAATGAGGAGATGGTGAGTGAAAAACAAGCAGCTCCAAATTTAAACTCTCTTCGTGGGTTTAATGTTATTGATGAGATAAAATACATCTTGGAAGAAGCTTGTCCACACACGGTTTCCTGTGCTGATATTTTGACCATCGTTGCTCGCGATGCTGTTGTGCTTAGAGGGGGGCCTGGATGGGAAGTTTTATTGGGAAGAAAAGACTCCCTGAAAGCAAGCTTTGATGGAGCCAACAAATACATCCCTTCTCCCAATTCCTCTCTTGAGACCCTAATTGCCAATTTTCAAGAACAGGGCCTTGATATTGGAGACTTGGTTGCTCTATCAGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTCAGACAAAGAGTATACCAAATGAACTCAGAAGAAGAACATGATAGATACAAGAGATACAACACATACAGAAGAATTTTAAGGTCCATTTGCCCTGAAACAGGCCAAGACCAGAGGATAGCACCCTTAGATTTTGGGACACCTGCAAGGTTTGACAATCACTACTTCCTCAACCTTCTTCAAGGCAAAGGATTGTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTCACATTAGAAGACAAGTTTGGAGCTATGCATCTGATCAAACCCTTTTCTTTGCTTCCTTTGTTAATTCCATTGTCAAGATGGGAAACATCAATGTCCTCACTCACCAACAAGGTGAAATAAGGAGGAATTGTAGGTTTACCAATCACTAG 999 41.94 MEILKILVAAIFGVALHGIECLSHDGLLVFDYYKETCPLVEDIVRRQVEIAVFKDPRMAASLLRLHFHDCFVMGCDASVLLDSNEEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPHTVSCADILTIVARDAVVLRGGPGWEVLLGRKDSLKASFDGANKYIPSPNSSLETLIANFQEQGLDIGDLVALSGSHTIGKARCLSFRQRVYQMNSEEEHDRYKRYNTYRRILRSICPETGQDQRIAPLDFGTPARFDNHYFLNLLQGKGLLGSDNVLITQDHEGHIRRQVWSYASDQTLFFASFVNSIVKMGNINVLTHQQGEIRRNCRFTNH 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71119881 71121839 + Tan0020148.1 Tan07g1935 759466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1935 332 FunFam Peroxidase 31 173 - -
Tan07g1935 332 Gene3D - 32 331 - -
Tan07g1935 332 CDD secretory_peroxidase 28 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan07g1935 332 FunFam Peroxidase 165 310 - -
Tan07g1935 332 ProSiteProfiles Plant heme peroxidase family profile. 27 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Tan07g1935 332 Pfam Peroxidase 44 294 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Tan07g1935 332 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1935 332 Gene3D Peroxidase, domain 2 165 311 - -
Tan07g1935 332 PANTHER PEROXIDASE 72-RELATED 14 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1261 Tan-Chr1:12218506 Tan07g1935 Tan-Chr7:71119881 1.30E-89 dispersed
Tan04g0935 Tan-Chr4:8233270 Tan07g1935 Tan-Chr7:71119881 2.50E-77 dispersed
Tan07g1935 Tan-Chr7:71119881 Tan08g2424 Tan-Chr8:75472120 3.80E-78 dispersed
Tan07g1935 Tan-Chr7:71119881 Tan07g1936 Tan-Chr7:71119881 6.30E-158 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1935 K00430 - csv:116402797 556.599