Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1936 ATGGAGATTCTGAAGATTTTGGTGGCTGCGATATTTGGTGTGGCTTTGCATGGAATTGAATGTTTAAGCCATGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCCTTGGTCGAAGATATCGTTCGACGACAAGTCGAGATTGCTGTGTTCAAAGATCCTCGCATGGCTGCTTCACTTCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGTGATGCATCAGTTCTTCTAGACAGTAATGAGGAGATGGTGAGTGAAAAACAAGCAGCTCCAAATTTAAACTCTCTTCGTGGGTTTAATGTTATTGATGAGATAAAATACATCTTGGAAGAAGCTTGTCCACACACGGTTTCCTGTGCTGATATTTTGACCATCGTTGCTCGCGATGCTGTTGTGCTTAGAGGGGGGCCTGGATGGGAAGTTTTATTGGGAAGAAAAGACTCCCTGAAAGCAAGCTTTGATGGAGCCAACAAATACATCCCTTCTCCCAATTCCTCTCTTGAGACCCTAATTGCCAATTTTCAAGAACAGGGCCTTGATATTGGAGACTTGGTTGCTCTATCAGGCCAAGACCAGAGGATAGCACCCTTAGATTTTGGGACACCTGCAAGGTTTGACAATCACTACTTCCTCAACCTTCTTCAAGGCAAAGGATTGTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTCACATTAGAAGACAAGTTTGGAGCTATGCATCTGATCAAACCCTTTTCTTTGCTTCCTTTGTTAATTCCATTGTCAAGATGGGAAACATCAATGTCCTCACTCACCAACAAGGTGAAATAAGGAGGAATTGTAGGTTTACCAATCACTAG 861 42.39 MEILKILVAAIFGVALHGIECLSHDGLLVFDYYKETCPLVEDIVRRQVEIAVFKDPRMAASLLRLHFHDCFVMGCDASVLLDSNEEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPHTVSCADILTIVARDAVVLRGGPGWEVLLGRKDSLKASFDGANKYIPSPNSSLETLIANFQEQGLDIGDLVALSGQDQRIAPLDFGTPARFDNHYFLNLLQGKGLLGSDNVLITQDHEGHIRRQVWSYASDQTLFFASFVNSIVKMGNINVLTHQQGEIRRNCRFTNH 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71119881 71121839 + Tan0020148.2 Tan07g1936 759467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1936 286 Gene3D - 265 285 - -
Tan07g1936 286 SUPERFAMILY Heme-dependent peroxidases 29 285 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 FunFam Peroxidase 31 173 - -
Tan07g1936 286 PANTHER PEROXIDASE 72-RELATED 195 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 Gene3D - 31 164 - -
Tan07g1936 286 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Tan07g1936 286 CDD secretory_peroxidase 28 284 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan07g1936 286 Pfam Peroxidase 196 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 Pfam Peroxidase 44 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 Gene3D Peroxidase, domain 2 195 264 - -
Tan07g1936 286 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 ProSiteProfiles Plant heme peroxidase family profile. 27 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan07g1936 286 Gene3D Peroxidase, domain 2 165 194 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1936 Tan-Chr7:71119881 Tan08g2424 Tan-Chr8:75472120 1.60E-64 dispersed
Tan07g1935 Tan-Chr7:71119881 Tan07g1936 Tan-Chr7:71119881 6.30E-158 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1936 K00430 - csv:101207771 454.907