Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g1968 | ATGGATTCACTTGACACTCCTCCTCCGCCGCTTTCAGCACCGTCCAACATGGCGGTCGGAGGACCGACGGCGTATTCGACGGCCATGTCCAACCCCAACAACAATGCCTCCTCCACGATTGGTCTAAATCCGGCTACAACTCAGATGATGCCGCCTTCTGCGCGATTTCCGTTTAACTCTATGATCGCCCCTGCATCCGTGCCTTTGGATTCTCTGAATGTTTCTCCGTACGACGGATCGCATTCCGGGAGTTTCAACGTTGATTCCGGGAAGAAGAAGAGAGGCCGGCCGCGGAAGTACGCGCCTGATGGTAACATTGCCTTGGGTTTGGCACCTACCACTGTTTCGTCTTCTGTTGGTCACGGGGATTTGAGCGGCACTCCTGATTCGGAGCAGCCGGCGAAGAAAGCGAGGGGAAGGCCACCTGGCTCGGGAAAGAAACAGATGAATGCACTTGGTTCAAGCGGCATTGGTTTTACTCCTCACGTTGTATTGGCGAAGCCTGGAGAGGACGTAGCAGCCAAAATTTTGTCCTTCTCACAGCAAGGACCACGAACTGTCTTTATTCTCTCTGCAAATGGTACCCTCACTAATGCTACCCTTCGACACTCGACGACATCTGGTGGTTCTGTGACATATGAGGGCCATTATGAGATAATCTCTCTCTCAGGCTCCTTTTTGCTATCGGAGAATAATGGAACTCGAAGTAGAACAGGTGGTTTGAGTGTGTTGCTGGCTGGGTCAGACGGACAAGTTCTTGGTGGTGGAGTTTCAGGAATGCTATTGGCAGGTTCCCAAGTACAGGTGATTGTGGGAAGTTTTATCGATGATGATAAAAAATCCAACACAAGTATGCTGAATTCTGGATCTTCATCTGCTGCGCCATTTCAAATGATAAACTTTGGTGGTGGAACAGCAGCAGCAGCCAGTCCTCCATCGTTAGGGGCATCGAGCGGCGAGTCGTCTGCCGAAAATGGAGGAGGCAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAGTAATAGCAGCCAGCCGATCCACAATATGCAAATGTACCACCAATTATGGGCAGGCCAAACACAGCAGTGA | 1089 | 50.87 | MDSLDTPPPPLSAPSNMAVGGPTAYSTAMSNPNNNASSTIGLNPATTQMMPPSARFPFNSMIAPASVPLDSLNVSPYDGSHSGSFNVDSGKKKRGRPRKYAPDGNIALGLAPTTVSSSVGHGDLSGTPDSEQPAKKARGRPPGSGKKQMNALGSSGIGFTPHVVLAKPGEDVAAKILSFSQQGPRTVFILSANGTLTNATLRHSTTSGGSVTYEGHYEIISLSGSFLLSENNGTRSRTGGLSVLLAGSDGQVLGGGVSGMLLAGSQVQVIVGSFIDDDKKSNTSMLNSGSSSAAPFQMINFGGGTAAAASPPSLGASSGESSAENGGGSPLNNRHPGMFSNSSQPIHNMQMYHQLWAGQTQQ | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 71451940 | 71456811 | - | Tan0019145.1 | Tan07g1968 | 759499 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g1968 | 362 | MobiDBLite | consensus disorder prediction | 110 | 125 | - | - | |
Tan07g1968 | 362 | CDD | DUF296 | 160 | 274 | IPR005175 | - | |
Tan07g1968 | 362 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 159 | 277 | - | - | |
Tan07g1968 | 362 | MobiDBLite | consensus disorder prediction | 311 | 344 | - | - | |
Tan07g1968 | 362 | Gene3D | - | 161 | 288 | - | - | |
Tan07g1968 | 362 | MobiDBLite | consensus disorder prediction | 81 | 151 | - | - | |
Tan07g1968 | 362 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 33 | 331 | IPR039605 | GO:0003680(InterPro) | |
Tan07g1968 | 362 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 161 | 275 | IPR005175 | - | |
Tan07g1968 | 362 | MobiDBLite | consensus disorder prediction | 309 | 344 | - | - | |
Tan07g1968 | 362 | MobiDBLite | consensus disorder prediction | 19 | 54 | - | - | |
Tan07g1968 | 362 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Tan07g1968 | 362 | ProSiteProfiles | PPC domain profile profile. | 153 | 296 | IPR005175 | - | |
Tan07g1968 | 362 | SMART | AT_hook_2 | 135 | 147 | IPR017956 | GO:0003677(InterPro) | |
Tan07g1968 | 362 | SMART | AT_hook_2 | 91 | 103 | IPR017956 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2147 | Tan-Chr1:25070130 | Tan07g1968 | Tan-Chr7:71451940 | 8.80E-81 | dispersed | |
Tan07g1968 | Tan-Chr7:71451940 | Tan10g0352 | Tan-Chr10:2874910 | 7.10E-46 | dispersed | |
Tan07g1968 | Tan-Chr7:71451940 | Tan07g1762 | Tan-Chr7:69191597 | 9.30E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g1968 | - | - | - | 0.0 |