Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g1999 ATGAGGAACTATGGCTCAGTTTCATATGATGAAGAAGAAGAACATAGTATGAAGAAGAGGAAGAATGAAGAAGATGAAGAAGAAGAAGAAGAAGATGATGATAAGGATGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAACAGACAAATAAAGTTGCTTTTTATAAACTCTTTGGTTTTGCTGATTTTTATGACTATTTTCTCATGACTATTGGCTCTATTGGAGCTTGTATCCATGGTGCTTCTGTTCCTGTCTTCTTCATCTTCTTTGGAAAACTCATTAATATCATTGGCATGGCTTATCTTTTCCCTGAAGAAGCTGCTCCCAAAGTTGCTAAGTACTCTTTGGATTTTTTATATCTCAGTGTAGCTATATTATTTTCATCATGGGCAGAGGTGGCTTGTTGGATGCACAGTGGGGAGCGTCAAGCAGCAAAAATGAGAATGGCATATTTAAGATCAATGTTGAATCAAGACATTAGCCTTTTTGACACTGAAGCTTCAACTGGTGAAGTTATTGCTGCTATAACCAGTGATATTGTTGTTGTTCAAGATGCCATTTCTGAGAAAGTTGGGAACTTTTTGCACTATATAAGCCGGTTTATATCAGGATTTATCATTGGATTTGTGAGGGTATGGCAAATCAGTCTTGTCACATTATCTATTGTCCCCTTAATTGCACTTGCTGGTGGTCTCTATGCTTTTGTCACCATTGGTCTTATTGCCAAAGTTAGAAAATCCTATGTCAAGGCTGGTGAGATTGCTGAAGAGATTCTAGGAAATGTAAGAACAGTTCAAGCATTTGCTGGGGAAGAAAGGGCTGTGAATTTATACAAAGGAGCTCTCAAGAATACCTACAAGTATGGGAGAAAAGCAGGGCTGGCTAAGGGACTGGGCCTGGGATCCATGCATTGTGTCCTTTTCTTATCATGGGCTCTGCTAGTTTGGTTCACCAGCATTGTTGTTCACAAGAAAATTGCCAATGGTGGAGAGTCCTTCACCACAATGCTTAATGTTGTCATTGCTGGCCTGTCACTTGGGCAGGCCGCACCAGACATTTCTGCCTTTGTTCGAGCAAAGGCAGCAGCCTATCCTATTTTTCAGATGATAGAGAGAAGCACAGTAAGCAAAAGCAGCTCCAAAACAGGCCGGAAATTAAACAAGCTTGATGGTCATATACAATTCAAGGATGTTAATTTCAGCTACCCTTCTCGTTCGGATGTAGTTATATTTAACAAGTTATCTCTTGATATTCCTGCTGGCAAGATTGTAGCTCTTGTGGGAGGAAGTGGTTCAGGGAAGAGCACAGTCATATCTTTGATCGAACGATTCTATGAACCCCTTTCTGGAGAGATTCTATTAGATGGTAACAACATCAAGGATCTGGACCTCAAGTGGCTTAGGCAGCAAATTGGTTTGGTCAATCAAGAGCCTGCCCTGTTCGCTACAAGCATTAGGGAGAACATTCTATATGGAAAAGATGATGCTACCCTCGAGGACATTACGCGTGCAGCAAAACTTTCTGAGGCTTTATCGTTTATAAACAATCTCCCTGAAAGATTTGAAACTCAGGTTGGTGAGAGAGGGGTCCAATTATCAGGGGGACAAAAACAAAGGATTGCAATATCTCGTGCAATTGTTAAAAATCCATCAATCCTGTTGTTGGATGAGGCAACAAGTGCACTAGATGCAGAATCTGAGAAGAGTGTTCAAGAGGCACTCGATCGTGTCATGGTTGGTCGAACAACCATAGTAGTGGCGCATCGCCTATCTACCATAAGGAATGCCGATGTCATTGCTGTCGTTCAAGAGGGTAAGATAGTCGAAACTGGAAGCCATGATGAGCTCATTTCAAAGCCAGACAGTGCCTATGCATCACTTGTCCAGTTCCAAGAAATGGCATCTCTGCAACGACATCCCTCAATCGGACAGTTGGGTCGACCACCGAGTATAAAGTACTCAAGAGAATTATCTCGCACTACAACAAGCTTTGGTGCAAGTTTTCGCTCTGAGAAAGAATCTCTTGGAAGGATTGGAGTTGATGGAATGGAAATGGAGAAACCAAGGCATGTTTCAGCAAGAAGACTTTACTCCATGGTCGGACCGGATTGGATGTATGGAGTTGTTGGCGTCATTGGAGCTTTCGTTACTGGATCCCAGATGCCCCTTTTTGCTCTTGGGGTCTCTCAGGCTCTTGTTGCTTTTTATATGGACTGGGATACAACTCAACATGAGATCAAGAAAATCTCTTTACTTTTCTGTGGAGGTGCAGTTTTAACTGTATTTTTTCATGCAGTTGAACATCTCTGTTTTGGAGTTATGGGAGAGCGACTCACTCTTCGAGTTCGAGAAATGATGTTCCATGCTATTTTGAGAAATGAGATAGGATGGTTCGATGATATAAACAACACAAGTGCTATGCTTTCGTCACGTCTAGAGACCGATGCAACTTTGTTACGAACTATAGTTGTCGACCGCTCTACAATTCTTCTGCAGAATGTAGCTTTGGTTGTTGCATCGTTCATCATTGCTTTCATATTAAATTGGAGAATCACTCTAGTCGTCTTGGCCACCTATCCATTGATCATTAGCGGTCACATTAGCGAGAAACTTTTTATGCAAGGCTATGGTGGAAACTTGAGCAAAGCATACCTGAAAGCCAATACACTTGCCGGTGAGGCAGTTGGTAACATTAGAACTGTTGCTGCATTTTGTTCTGAGGAGAAAGTCCTTGATCTATATGCCAAGGAGCTCATTGAGCCCTCGAAACGTTCACTTAAACGTGGACAGATTGCTGGAATATTCTATGGTGTCTCCCAATTCTTCATCTTTTCATCTTATGGCCTGGCATTGTGGTATGGTTCGGTTTTGATGGGACAGGGGCTTGCTAGCTTCAAATCTGTTATGAAAGCATTCATGGTTTTGATAGTAACTGCATTAGCAATGGGTGAGACTTTGGCTTTGGCCCCTGACCTTTTGAAAGGAAACCAGATGGTGGCATCAGTGTTCGAAGTGATGGATCGACAGACAGAGGTGTCGGGCGATGTTGGCGAAGAGCTAAATGTGGTGGAGGGTACCATTGAGCTGAGGAGTGTTGAGTTCAGCTATCCATCAAGACCAGATGTTTTGATCTTCAAAGATTTCAATCTTAAAGTGAGAGCAGGCAAGAGTATAGCATTAGTTGGGCAAAGCGGTTCGGGTAAAAGCTCAGTTCTCGCTCTTATACTGCGATTTTACGATCCAATTGCTGGGAGGGTGATGATTGATGGAAAAGATATTAAAAAACTGAAGCTCAAATCTCTCAGAAAGCACATTGGCCTTGTCCAACAGGAACCGGCTCTTTTCGCCACGTCGATTTATGAGAACATTCTTTACGGGAAAGAAGGAGCTTCAGAAGCCGAAGTATTCGAAGCAGCAAAGCTTTCCAATGCACATAACTTCGTCAGTGCACTTCCTGAAGGCTACTCAACCAAAGTAGGCGAAAGAGGTATCCAACTTTCAGGTGGCCAACGACAAAGGATAGCGATAGCCAGAGCAGTCCTAAAGAACCCAGAAATACTACTACTCGACGAAGCCACGAGTGCACTCGATGTCGAATCGGAACGCGTGGTTCAGCAAGCCTTAGACAGGTTGATGAAGAACAGAACAACAGTGGTGGTTGCACATAGGCTTTCTACCATTAAAAACTGTGACCAAATCTCAGTGATCCAAGATGGAAAGATAATAGAACAAGGGACTCATTCAAGCCTTACTGAGAACAAGAATGGAGCTTATTACAAGTTAATCAACATCCAACAACAACAGCAACAAATACAGTGA 3822 42.41 MRNYGSVSYDEEEEHSMKKRKNEEDEEEEEEDDDKDEKKKKKKKKKKQQTNKVAFYKLFGFADFYDYFLMTIGSIGACIHGASVPVFFIFFGKLINIIGMAYLFPEEAAPKVAKYSLDFLYLSVAILFSSWAEVACWMHSGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVIAAITSDIVVVQDAISEKVGNFLHYISRFISGFIIGFVRVWQISLVTLSIVPLIALAGGLYAFVTIGLIAKVRKSYVKAGEIAEEILGNVRTVQAFAGEERAVNLYKGALKNTYKYGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKKIANGGESFTTMLNVVIAGLSLGQAAPDISAFVRAKAAAYPIFQMIERSTVSKSSSKTGRKLNKLDGHIQFKDVNFSYPSRSDVVIFNKLSLDIPAGKIVALVGGSGSGKSTVISLIERFYEPLSGEILLDGNNIKDLDLKWLRQQIGLVNQEPALFATSIRENILYGKDDATLEDITRAAKLSEALSFINNLPERFETQVGERGVQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTIVVAHRLSTIRNADVIAVVQEGKIVETGSHDELISKPDSAYASLVQFQEMASLQRHPSIGQLGRPPSIKYSRELSRTTTSFGASFRSEKESLGRIGVDGMEMEKPRHVSARRLYSMVGPDWMYGVVGVIGAFVTGSQMPLFALGVSQALVAFYMDWDTTQHEIKKISLLFCGGAVLTVFFHAVEHLCFGVMGERLTLRVREMMFHAILRNEIGWFDDINNTSAMLSSRLETDATLLRTIVVDRSTILLQNVALVVASFIIAFILNWRITLVVLATYPLIISGHISEKLFMQGYGGNLSKAYLKANTLAGEAVGNIRTVAAFCSEEKVLDLYAKELIEPSKRSLKRGQIAGIFYGVSQFFIFSSYGLALWYGSVLMGQGLASFKSVMKAFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRQTEVSGDVGEELNVVEGTIELRSVEFSYPSRPDVLIFKDFNLKVRAGKSIALVGQSGSGKSSVLALILRFYDPIAGRVMIDGKDIKKLKLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVFEAAKLSNAHNFVSALPEGYSTKVGERGIQLSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMKNRTTVVVAHRLSTIKNCDQISVIQDGKIIEQGTHSSLTENKNGAYYKLINIQQQQQQIQ 1273
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 71669247 71678605 - Tan0000769.1 Tan07g1999 759530
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan07g1999 1273 CDD ABC_6TM_Pgp_ABCB1_D2_like 698 1013 - -
Tan07g1999 1273 MobiDBLite consensus disorder prediction 1 43 - -
Tan07g1999 1273 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan07g1999 1273 ProSitePatterns ABC transporters family signature. 1167 1181 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan07g1999 1273 MobiDBLite consensus disorder prediction 1 24 - -
Tan07g1999 1273 Pfam ABC transporter transmembrane region 710 980 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan07g1999 1273 Pfam ABC transporter transmembrane region 72 342 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan07g1999 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1022 1266 IPR027417 -
Tan07g1999 1273 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Tan07g1999 1273 Gene3D ABC transporter type 1, transmembrane domain 10 107 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan07g1999 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 632 IPR027417 -
Tan07g1999 1273 Pfam ABC transporter 413 561 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan07g1999 1273 SUPERFAMILY ABC transporter transmembrane region 58 364 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan07g1999 1273 Pfam ABC transporter 1047 1195 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan07g1999 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan07g1999 1273 CDD ABC_6TM_Pgp_ABCB1_D1_like 70 367 - -
Tan07g1999 1273 Gene3D - 392 645 IPR027417 -
Tan07g1999 1273 Coils Coil 9 48 - -
Tan07g1999 1273 CDD ABC_MTABC3_MDL1_MDL2 1028 1263 - -
Tan07g1999 1273 FunFam ABC transporter B family member 1 384 633 - -
Tan07g1999 1273 SUPERFAMILY ABC transporter transmembrane region 687 1009 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan07g1999 1273 Gene3D ABC transporter type 1, transmembrane domain 119 869 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan07g1999 1273 PANTHER ABC TRANSPORTER B FAMILY 15 655 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Tan07g1999 1273 Gene3D ABC transporter type 1, transmembrane domain 942 1271 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Tan07g1999 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1028 1264 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan07g1999 1273 SMART AAA_5 1055 1227 IPR003593 GO:0016887(InterPro)
Tan07g1999 1273 SMART AAA_5 421 607 IPR003593 GO:0016887(InterPro)
Tan07g1999 1273 FunFam ABC transporter B family member 19 1018 1267 - -
Tan07g1999 1273 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 359 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Tan07g1999 1273 Gene3D - 1018 1267 IPR027417 -
Tan07g1999 1273 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 709 995 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1999 Tan-Chr7:71669247 Tan11g0522 Tan-Chr11:4464064 0.00E+00 dispersed
Tan09g1763 Tan-Chr9:69149726 Tan07g1999 Tan-Chr7:71669247 3.40E-32 dispersed
Tan07g1999 Tan-Chr7:71669247 Tan07g2000 Tan-Chr7:71669247 0.00E+00 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g1999 K05658 - csv:101219304 2241.08