Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2005 ATGTATGGGGATTGCCAAGTGATGGCAAACAATATGGGAGGAAATATGGTTTCCTCTGAATCTCTCTTCTCTTCTCCCATTCAAAACCCTAATTTCAACTTCATGTCCAATTTCCAACATTTTCCTTCCATTATTCCTAAGGAAGAAAATGGGTTGATGATGAGAGGAAAAGAAGATATAGAAAGTGGGTCTGGAAGTGAACAACTTGTTGAAGAAAATCCAGGAATTGAAATGGAAAGTAATGATAATAATATTATTCAGCAAAATCAGAAGAAAAAACGTTATCATAGGCATACTGCTCGCCAGATCCAAGAAATGGAAGCTTTGTTTAAGGAATGTCCACACCCAGATGACAAACAAAGGCTAAAACTCAGCCAAGAACTTGGCCTCAAACCTCGCCAAGTCAAGTTTTGGTTCCAAAATCGCAGAACCCAAATGAAGGCACAACAAGACAGAGCTGATAATGTGATACTTAGGGCTGAAAATGAGACCTTAAAGAATGAGAATTATAGACTGCAAACTGCCCTAAGAAATATCATATGCCCTAGCTGTGGAGGGCAGGGTATCCTAGGGGAGCCAAGCTTGGATGAACAACAGCTTCGCCTTGAGAATGCAAGACTTAGAGAACAGCTAGAACAAGTTTGCTCCTTGACATCAAGATACACTGGTCGCCCAATCCAAGGGATGGCCTCCACAGCTCCTCCTCTTATGCAACCATCTTTGGATTTGGACATGAACATATACTCAAGGCAATACACAGAGGCCATGGTTTCGTCCTCCGAAATGATGCCATTGGCGTCGATGCTCCCGCCCGAGGCTGCCCACTTTCCGGAGGGCGGTCTATTAATTGAGGAGGAAAAAACACTCGCGATGGACCTTGCTGTGTCGTCCATGACCGAACTTGTGAAGATGTGCCGCTCGACCGAGCCTCTTTGGATTCGAAACAGCGAGAGCGGTAAGGAAGTTCTAAATGTAGAAGAGCATGCCAGGATGTTTCCATGGCCATTGAACCTCAAGCAACACTTGATGAATGAGTTTAGGACCGAAGCCACGCGCGACAGCGCCGTTGTTATAATGAATAGCATCACCCTCGTCGATGCCTTTCTCGACGCTAACAAATGGATGGAGTTATTTCCTTCAATCGTGGCCAAAGCAAAAACTGTGCAAGTAATTTCATCAAGTGTTTCAGGGCATGCTAGTGGGTCCCTTCAGCTGATGTATGCAGAACTTCAGACTCTTTCTCCTCTAGTTCCGACGAGAGAAGCCCATTTCCTCCGGTGCTGCCAGCAGAACGCCGATGAAGGAAGCTGGGCCATCGTTGATTTTCCGATCGATAGCTTCCACGATAGTCTTCAGCATTCGTTTCCCAGATATAGGAGAAGGCCCTCTGGCTGCATTATCCAAGACATGCCCAATGGATATTCTAGGGTTACATGGGTGGAGCATGCAGAGATAGAAGAGAAGCCAATCCATCAAATATTCAATCACTTTGTTCATAGTGGAATGGCTTTTGGTGCACATCGCTGGTTGGCTATCTTACAAAGACAATGCGAGAGAATTGCAAGCCTCATGGCTAGAAATATTTCTGATCTTGGAGTGATACCTTCACCAGAAGCAAGGCAAAACCTAATGAAACTAGCACAAAGAATGATCAAAACTTTCTCTGTCAACATTAGCACCTCGGCCGGCCAGTCGTGGACCGCGCTGTCCGATTCTCCCGATGATACCGTCCGTATAACCACTCGAAAAATCGTCGAGCCTGGCCAACCTAATGGGGTTATTCTCAGCGCTGTTTCCACCACTTGGCTTCCCTATCCTCATTACCGAGTCTTCGATCTTCTACGAGACGAACGACGACGATCTCAGCTGGAGGTTCTTTCCAATGGGAATTCGTTGCATGAGGTTGCTCACATTGCTAATGGCTCCCACCCTGGAAACTGTATCTCTCTTCTTCGTATCAATGTGGCTAGCAATTCCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACAGACCAGTCTGGCAGCCTTGTCGTCTATGCGACGATCGACGTCGATTCGATTCAGTTAGCCATGAGCGGAGAAGACCCCTCCTGCATTCCCCTCCTCCCCATAGGATTTTCCATCGTCCCCGTCGTCGGTTCTACCGCTAACGGACACCCAGCACTGCCACCCGAGGACGGTGCCACTAATGCTGCAGTCGTCAACTCCGGCTGCCTTCTTACCGTCGGCCTGCAAGTTCTAGCCAGCACAATTCCATCGGCGAAGCTCAACCTATCTAGCGTCACCGCCATCAACAACCACCTCTGTAACACGGTGCACCAAATCAACGCCGCTCTCGGGAGCCCAACTCGTCCCGACAACGACAACGCTGCAGCCGAGCCGAATGCTGCACCGCTGCCGCCTCCGCCCCCGCCCAAGCAATAA 2430 48.35 MYGDCQVMANNMGGNMVSSESLFSSPIQNPNFNFMSNFQHFPSIIPKEENGLMMRGKEDIESGSGSEQLVEENPGIEMESNDNNIIQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENETLKNENYRLQTALRNIICPSCGGQGILGEPSLDEQQLRLENARLREQLEQVCSLTSRYTGRPIQGMASTAPPLMQPSLDLDMNIYSRQYTEAMVSSSEMMPLASMLPPEAAHFPEGGLLIEEEKTLAMDLAVSSMTELVKMCRSTEPLWIRNSESGKEVLNVEEHARMFPWPLNLKQHLMNEFRTEATRDSAVVIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHASGSLQLMYAELQTLSPLVPTREAHFLRCCQQNADEGSWAIVDFPIDSFHDSLQHSFPRYRRRPSGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNHFVHSGMAFGAHRWLAILQRQCERIASLMARNISDLGVIPSPEARQNLMKLAQRMIKTFSVNISTSAGQSWTALSDSPDDTVRITTRKIVEPGQPNGVILSAVSTTWLPYPHYRVFDLLRDERRRSQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYATIDVDSIQLAMSGEDPSCIPLLPIGFSIVPVVGSTANGHPALPPEDGATNAAVVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTVHQINAALGSPTRPDNDNAAAEPNAAPLPPPPPPKQ 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71725670 71733148 + Tan0011830.1 Tan07g2005 759536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2005 809 CDD START_ArGLABRA2_like 287 518 - -
Tan07g2005 809 Gene3D - 311 517 IPR023393 -
Tan07g2005 809 FunFam Homeobox-leucine zipper protein HDG1 78 165 - -
Tan07g2005 809 SUPERFAMILY Bet v1-like 285 521 - -
Tan07g2005 809 ProSiteProfiles START domain profile. 283 522 IPR002913 GO:0008289(InterPro)
Tan07g2005 809 CDD homeodomain 92 150 IPR001356 GO:0003677(InterPro)
Tan07g2005 809 MobiDBLite consensus disorder prediction 781 809 - -
Tan07g2005 809 ProSitePatterns 'Homeobox' domain signature. 124 147 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Tan07g2005 809 SUPERFAMILY Homeodomain-like 79 150 IPR009057 -
Tan07g2005 809 Coils Coil 197 217 - -
Tan07g2005 809 ProSiteProfiles 'Homeobox' domain profile. 89 149 IPR001356 GO:0003677(InterPro)
Tan07g2005 809 SUPERFAMILY Bet v1-like 559 778 - -
Tan07g2005 809 Gene3D - 78 160 - -
Tan07g2005 809 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 83 781 IPR042160 -
Tan07g2005 809 Pfam Homeodomain 92 147 IPR001356 GO:0003677(InterPro)
Tan07g2005 809 Pfam START domain 294 519 IPR002913 GO:0008289(InterPro)
Tan07g2005 809 SMART HOX_1 90 153 IPR001356 GO:0003677(InterPro)
Tan07g2005 809 Coils Coil 148 168 - -
Tan07g2005 809 SMART START_1 292 519 IPR002913 GO:0008289(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3373 Tan-Chr5:85543244 Tan07g2005 Tan-Chr7:71725670 2.60E-185 dispersed
Tan07g2005 Tan-Chr7:71725670 Tan10g0284 Tan-Chr10:2429494 5.60E-152 dispersed
Tan07g2005 Tan-Chr7:71725670 Tan02g0328 Tan-Chr2:2703797 1.90E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28015 PF01852 START 1.90E-44 CL0209 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2005 - - - 0.0