Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2007 ATGGAGTTATTTCCTGCACAGCCAGATTTGTCACTACAAATTAGCCCTCCCAATACAAATAAACCCTCTTCCACTTGGAGAAGAACAACCTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTCAATTTAGAGTCCTCTAAAACCACTCCCAAACATCACCCTAATCATCATTTTGATCTCTCACTTTCTAATTTCACTCAAATTAACCATCACCAATACTCCAATATTCCTCCTCCTCTTCTTCCTCATCCTCCTCCTCATCATCATCTTCATCATCATCACCATCATCCCGCTTTCAACGGCGGTGGCGCTCACCTTTTCGAAACCCTACACAAAAACCACCACCGACCCGCGATTTTCCACCACAATCCGCCGTCATTAGAACCACCGCCTCCGACACCGATCACGTTCCCGGGCCAGAACAATAATGTTCAAGACTTGGGATTTCTGCGACCCATTAGAGGAATTCCGGTGTACCATCAGACAGCTAACCCCGCCGGCAGCGGCAGCGGCGGCGCCGTTACTGCTCCCTCCGCCGCCGGCCATGGCCAGATTATGATGCGATCGAGATTCTTGTCTAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCAAGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTCCTCGGCGGCCATGAAAGAGCTACACCGAAGTCAGTTCTCGAGCTTATGGATGTCAAAGATCTAACCTTGGCCCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGCCAATCAGATTTATACGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAGCCAACCATGGGAAGGCAAAATGAGCATTCAGTTCAACAAAATAGGCAAAACCCTCATCAAGACAAAGATTATCATGCCCTGTGGAGCAATTCTTCAAGAGAAGCTTGGTTACATGGTTTGCCTAATGATTCTTCTAGGGACCTTTCTTCGTCCCTCGAGAATGATATGGATCCAAAGAGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACAGATCTTTGTGGAAGCACAAATCCTCAAAAGCCTAATTTGGAATTCACATTAGGAAGGCCAGTTTGA 1173 45.78 MELFPAQPDLSLQISPPNTNKPSSTWRRTTSQEEVDLGFWNNLNLESSKTTPKHHPNHHFDLSLSNFTQINHHQYSNIPPPLLPHPPPHHHLHHHHHHPAFNGGGAHLFETLHKNHHRPAIFHHNPPSLEPPPPTPITFPGQNNNVQDLGFLRPIRGIPVYHQTANPAGSGSGGAVTAPSAAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPTMGRQNEHSVQQNRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDMDPKSSNNERLSEISSSTDLCGSTNPQKPNLEFTLGRPV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71775286 71780018 + Tan0012196.1 Tan07g2007 759538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2007 390 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 389 IPR044847 GO:0000976(InterPro)|GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro)
Tan07g2007 390 MobiDBLite consensus disorder prediction 11 30 - -
Tan07g2007 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 259 IPR006447 GO:0003677(InterPro)
Tan07g2007 390 SUPERFAMILY Homeodomain-like 203 259 IPR009057 -
Tan07g2007 390 Gene3D - 205 262 - -
Tan07g2007 390 FunFam Myb family transcription factor 204 262 - -
Tan07g2007 390 Pfam Myb-like DNA-binding domain 207 258 IPR001005 -
Tan07g2007 390 MobiDBLite consensus disorder prediction 1 30 - -
Tan07g2007 390 MobiDBLite consensus disorder prediction 335 390 - -
Tan07g2007 390 MobiDBLite consensus disorder prediction 359 382 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4854 Tan-Chr1:114254903 Tan07g2007 Tan-Chr7:71775286 9.50E-30 dispersed
Tan02g1912 Tan-Chr2:87549699 Tan07g2007 Tan-Chr7:71775286 6.90E-31 dispersed
Tan04g2177 Tan-Chr4:77985316 Tan07g2007 Tan-Chr7:71775286 7.90E-41 dispersed
Tan04g2178 Tan-Chr4:77985316 Tan07g2007 Tan-Chr7:71775286 7.30E-41 dispersed
Tan05g2161 Tan-Chr5:72395274 Tan07g2007 Tan-Chr7:71775286 2.30E-30 dispersed
Tan05g2162 Tan-Chr5:72395274 Tan07g2007 Tan-Chr7:71775286 1.40E-30 dispersed
Tan07g2007 Tan-Chr7:71775286 Tan07g2179 Tan-Chr7:73328062 7.00E-15 dispersed
Tan11g1417 Tan-Chr11:12746496 Tan07g2007 Tan-Chr7:71775286 6.80E-30 transposed
Tan01g2221 Tan-Chr1:26405776 Tan07g2007 Tan-Chr7:71775286 1.00E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28017 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2007 - - - 0.0