Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g2017 | ATGGGTGGTAGCGAGATGAATAAACCAGAGAAGGAGGAATCCAAGACGATGCCTGCCACTACACAGGAAGAGTCTCCGAACACAAGCACAGGCGTTGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACTAGCCCCCAGGCACACCCATATATGTGGGGGGTACAGCCCATTATGCCCCCTTATGGAACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCGCCCATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATATTCCAGGCAACATGGAAGGGGATGGTAAGCCATCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATAACTGGGAAGCACAATGAGCTCAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTTCAAGTGAAAGAAGTGATGCTGATTCTCAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGGGGGACTCCTAATGATTTAATGCATGGTTCTCAGAATGAAGCACATAGTCTCGCTCTCGCGCATCCATTGGTGAACCAAACAATGTCCATTATACCAATTCAACCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCAACAACTTCTGCCATCCCTTCATTGTGTGGGAAGGTTCCTTCGGCTCCGGTTGCAGGAGCTGCTGCTGCTGGGTCACGAGACAGCATTCAGTCACAGATTTGGTTACAGGATGAAAGGGAGCTAAAAAGGCAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGATGAGCTTTCTCAGCGTGCTGACGCTTTAAAGGAGGAAAATGCGAGTCTTAGATCCGAAGTGGATAGGATTAGGTGCGAGTACGAGCAACTTCTTTCAGAGAATGCCTCTCTCAAGAGGAGGCTCGGAGAAAGTGATGGAAATGAAGATCCAAGATCCGCCAAAGACAGCCAAAATTTGAATAACGAAGCTCAGCATACATCCCGGACCGAACTCGCTAAGGGGTAA | 1209 | 46.24 | MGGSEMNKPEKEESKTMPATTQEESPNTSTGVVNPEWSGFQAYSPIPPPGYLATSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNIPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKHNELKPSGTSANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNDLMHGSQNEAHSLALAHPLVNQTMSIIPIQPSGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVAGAAAAGSRDSIQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRADALKEENASLRSEVDRIRCEYEQLLSENASLKRRLGESDGNEDPRSAKDSQNLNNEAQHTSRTELAKG | 402 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 71862458 | 71870506 | - | Tan0006773.4 | Tan07g2017 | 759548 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 364 | 402 | - | - | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 381 | 395 | - | - | |
Tan07g2017 | 402 | Pfam | bZIP transcription factor | 300 | 362 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2017 | 402 | Coils | Coil | 313 | 368 | - | - | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 302 | 326 | - | - | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 137 | 215 | - | - | |
Tan07g2017 | 402 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 307 | 322 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2017 | 402 | SMART | brlzneu | 300 | 364 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2017 | 402 | Pfam | Disordered region downstream of MFMR | 134 | 268 | - | - | |
Tan07g2017 | 402 | CDD | bZIP_plant_GBF1 | 305 | 355 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 19 | 36 | - | - | |
Tan07g2017 | 402 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 22 | 394 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro) | |
Tan07g2017 | 402 | Gene3D | - | 303 | 357 | - | - | |
Tan07g2017 | 402 | SUPERFAMILY | Leucine zipper domain | 303 | 359 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 145 | 175 | - | - | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Tan07g2017 | 402 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 302 | 365 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2017 | 402 | MobiDBLite | consensus disorder prediction | 366 | 380 | - | - | |
Tan07g2017 | 402 | Pfam | G-box binding protein MFMR | 1 | 95 | IPR012900 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g2014 | Tan-Chr7:71862458 | Tan07g2017 | Tan-Chr7:71862458 | 2.20E-221 | dispersed | |
Tan07g2015 | Tan-Chr7:71862458 | Tan07g2017 | Tan-Chr7:71862458 | 2.20E-221 | dispersed | |
Tan07g2017 | Tan-Chr7:71862458 | Tan07g2019 | Tan-Chr7:71862458 | 2.20E-221 | dispersed | |
Tan07g2016 | Tan-Chr7:71862458 | Tan07g2017 | Tan-Chr7:71862458 | 7.80E-202 | tandem | |
Tan07g2017 | Tan-Chr7:71862458 | Tan07g2018 | Tan-Chr7:71862458 | 2.20E-221 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28021 | PF16596 | MFMR_assoc | 1.60E-45 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g2017 | K09060 | - | csv:101214217 | 701.819 |