Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2017 ATGGGTGGTAGCGAGATGAATAAACCAGAGAAGGAGGAATCCAAGACGATGCCTGCCACTACACAGGAAGAGTCTCCGAACACAAGCACAGGCGTTGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACTAGCCCCCAGGCACACCCATATATGTGGGGGGTACAGCCCATTATGCCCCCTTATGGAACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCGCCCATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATATTCCAGGCAACATGGAAGGGGATGGTAAGCCATCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATAACTGGGAAGCACAATGAGCTCAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTTCAAGTGAAAGAAGTGATGCTGATTCTCAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGGGGGACTCCTAATGATTTAATGCATGGTTCTCAGAATGAAGCACATAGTCTCGCTCTCGCGCATCCATTGGTGAACCAAACAATGTCCATTATACCAATTCAACCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCAACAACTTCTGCCATCCCTTCATTGTGTGGGAAGGTTCCTTCGGCTCCGGTTGCAGGAGCTGCTGCTGCTGGGTCACGAGACAGCATTCAGTCACAGATTTGGTTACAGGATGAAAGGGAGCTAAAAAGGCAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGATGAGCTTTCTCAGCGTGCTGACGCTTTAAAGGAGGAAAATGCGAGTCTTAGATCCGAAGTGGATAGGATTAGGTGCGAGTACGAGCAACTTCTTTCAGAGAATGCCTCTCTCAAGAGGAGGCTCGGAGAAAGTGATGGAAATGAAGATCCAAGATCCGCCAAAGACAGCCAAAATTTGAATAACGAAGCTCAGCATACATCCCGGACCGAACTCGCTAAGGGGTAA 1209 46.24 MGGSEMNKPEKEESKTMPATTQEESPNTSTGVVNPEWSGFQAYSPIPPPGYLATSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNIPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKHNELKPSGTSANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNDLMHGSQNEAHSLALAHPLVNQTMSIIPIQPSGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVAGAAAAGSRDSIQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRADALKEENASLRSEVDRIRCEYEQLLSENASLKRRLGESDGNEDPRSAKDSQNLNNEAQHTSRTELAKG 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71862458 71870506 - Tan0006773.4 Tan07g2017 759548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2017 402 MobiDBLite consensus disorder prediction 364 402 - -
Tan07g2017 402 MobiDBLite consensus disorder prediction 1 36 - -
Tan07g2017 402 MobiDBLite consensus disorder prediction 381 395 - -
Tan07g2017 402 Pfam bZIP transcription factor 300 362 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2017 402 Coils Coil 313 368 - -
Tan07g2017 402 MobiDBLite consensus disorder prediction 302 326 - -
Tan07g2017 402 MobiDBLite consensus disorder prediction 137 215 - -
Tan07g2017 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 307 322 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2017 402 SMART brlzneu 300 364 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2017 402 Pfam Disordered region downstream of MFMR 134 268 - -
Tan07g2017 402 CDD bZIP_plant_GBF1 305 355 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2017 402 MobiDBLite consensus disorder prediction 19 36 - -
Tan07g2017 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 22 394 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Tan07g2017 402 Gene3D - 303 357 - -
Tan07g2017 402 SUPERFAMILY Leucine zipper domain 303 359 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2017 402 MobiDBLite consensus disorder prediction 145 175 - -
Tan07g2017 402 MobiDBLite consensus disorder prediction 1 18 - -
Tan07g2017 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 302 365 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2017 402 MobiDBLite consensus disorder prediction 366 380 - -
Tan07g2017 402 Pfam G-box binding protein MFMR 1 95 IPR012900 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2014 Tan-Chr7:71862458 Tan07g2017 Tan-Chr7:71862458 2.20E-221 dispersed
Tan07g2015 Tan-Chr7:71862458 Tan07g2017 Tan-Chr7:71862458 2.20E-221 dispersed
Tan07g2017 Tan-Chr7:71862458 Tan07g2019 Tan-Chr7:71862458 2.20E-221 dispersed
Tan07g2016 Tan-Chr7:71862458 Tan07g2017 Tan-Chr7:71862458 7.80E-202 tandem
Tan07g2017 Tan-Chr7:71862458 Tan07g2018 Tan-Chr7:71862458 2.20E-221 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28021 PF16596 MFMR_assoc 1.60E-45 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2017 K09060 - csv:101214217 701.819