Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2021 ATGTGGGGGGTACAGCCCATTATGCCCCCTTATGGAACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCGCCCATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATATTCCAGGCAACATGGAAGGGGATGGTAAGCCATCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATAACTGGGAAGCACAATGAGCTCAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTTCAAGTGAAAGAAGTGATGCTGATTCTCAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGGGGGACTCCTAATGATTTAATGCATGGTTCTCAGAATGAAGCACATAGTCTCGCTCTCGCGCATCCATTGGTGAACCAAACAATGTCCATTATACCAATTCAACCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCAACAACTTCTGCCATCCCTTCATTGTGTGGGAAGGTTCCTTCGGCTCCGGTTGCAGGAGCTGCTGCTGCTGGGTCACGAGACAGCATTCAGTCACAGATTTGGTTACAGGATGAAAGGGAGCTAAAAAGGCAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGATGAGCTTTCTCAGCGTGCTGACGCTTTAAAGGAGGAAAATGCGAGTCTTAGATCCGAAGTGGATAGGATTAGGTGCGAGTACGAGCAACTTCTTTCAGAGAATGCCTCTCTCAAGAGGAGGCTCGGAGAAAGTGATGGAAATGAAGATCCAAGATCCGCCAAAGACAGCCAAAATTTGAATAACGAAGCTCAGCATACATCCCGGACCGAACTCGCTAAGGGGTAA 1026 45.71 MWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNIPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKHNELKPSGTSANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNDLMHGSQNEAHSLALAHPLVNQTMSIIPIQPSGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVAGAAAAGSRDSIQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRADALKEENASLRSEVDRIRCEYEQLLSENASLKRRLGESDGNEDPRSAKDSQNLNNEAQHTSRTELAKG 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71862458 71870506 - Tan0006773.8 Tan07g2021 759552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2021 341 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 333 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Tan07g2021 341 Coils Coil 252 307 - -
Tan07g2021 341 MobiDBLite consensus disorder prediction 305 319 - -
Tan07g2021 341 CDD bZIP_plant_GBF1 244 294 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2021 341 Pfam G-box binding protein MFMR 1 34 IPR012900 -
Tan07g2021 341 MobiDBLite consensus disorder prediction 320 334 - -
Tan07g2021 341 MobiDBLite consensus disorder prediction 303 341 - -
Tan07g2021 341 MobiDBLite consensus disorder prediction 256 284 - -
Tan07g2021 341 MobiDBLite consensus disorder prediction 84 114 - -
Tan07g2021 341 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 304 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2021 341 MobiDBLite consensus disorder prediction 241 284 - -
Tan07g2021 341 Pfam bZIP transcription factor 239 301 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2021 341 Pfam Disordered region downstream of MFMR 73 207 - -
Tan07g2021 341 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 246 261 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2021 341 SMART brlzneu 239 303 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2021 341 SUPERFAMILY Leucine zipper domain 242 298 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2021 341 Gene3D - 242 296 - -
Tan07g2021 341 MobiDBLite consensus disorder prediction 76 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2019 Tan-Chr7:71862458 Tan07g2021 Tan-Chr7:71862458 5.60E-185 dispersed
Tan07g2021 Tan-Chr7:71862458 Tan07g2023 Tan-Chr7:71862458 5.20E-131 dispersed
Tan07g2020 Tan-Chr7:71862458 Tan07g2021 Tan-Chr7:71862458 2.80E-185 tandem
Tan07g2021 Tan-Chr7:71862458 Tan07g2022 Tan-Chr7:71862458 5.20E-131 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28025 PF16596 MFMR_assoc 1.20E-45 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2021 K09060 - csv:101214217 583.563