Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g2021 | ATGTGGGGGGTACAGCCCATTATGCCCCCTTATGGAACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCGCCCATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATATTCCAGGCAACATGGAAGGGGATGGTAAGCCATCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATAACTGGGAAGCACAATGAGCTCAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTTCAAGTGAAAGAAGTGATGCTGATTCTCAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGGGGGACTCCTAATGATTTAATGCATGGTTCTCAGAATGAAGCACATAGTCTCGCTCTCGCGCATCCATTGGTGAACCAAACAATGTCCATTATACCAATTCAACCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCAACAACTTCTGCCATCCCTTCATTGTGTGGGAAGGTTCCTTCGGCTCCGGTTGCAGGAGCTGCTGCTGCTGGGTCACGAGACAGCATTCAGTCACAGATTTGGTTACAGGATGAAAGGGAGCTAAAAAGGCAAAGAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGATGAGCTTTCTCAGCGTGCTGACGCTTTAAAGGAGGAAAATGCGAGTCTTAGATCCGAAGTGGATAGGATTAGGTGCGAGTACGAGCAACTTCTTTCAGAGAATGCCTCTCTCAAGAGGAGGCTCGGAGAAAGTGATGGAAATGAAGATCCAAGATCCGCCAAAGACAGCCAAAATTTGAATAACGAAGCTCAGCATACATCCCGGACCGAACTCGCTAAGGGGTAA | 1026 | 45.71 | MWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNIPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKHNELKPSGTSANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNDLMHGSQNEAHSLALAHPLVNQTMSIIPIQPSGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVAGAAAAGSRDSIQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRADALKEENASLRSEVDRIRCEYEQLLSENASLKRRLGESDGNEDPRSAKDSQNLNNEAQHTSRTELAKG | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 71862458 | 71870506 | - | Tan0006773.8 | Tan07g2021 | 759552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g2021 | 341 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 333 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro) | |
Tan07g2021 | 341 | Coils | Coil | 252 | 307 | - | - | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 305 | 319 | - | - | |
Tan07g2021 | 341 | CDD | bZIP_plant_GBF1 | 244 | 294 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2021 | 341 | Pfam | G-box binding protein MFMR | 1 | 34 | IPR012900 | - | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 320 | 334 | - | - | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 303 | 341 | - | - | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 256 | 284 | - | - | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 84 | 114 | - | - | |
Tan07g2021 | 341 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 241 | 304 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 241 | 284 | - | - | |
Tan07g2021 | 341 | Pfam | bZIP transcription factor | 239 | 301 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2021 | 341 | Pfam | Disordered region downstream of MFMR | 73 | 207 | - | - | |
Tan07g2021 | 341 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 246 | 261 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2021 | 341 | SMART | brlzneu | 239 | 303 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2021 | 341 | SUPERFAMILY | Leucine zipper domain | 242 | 298 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2021 | 341 | Gene3D | - | 242 | 296 | - | - | |
Tan07g2021 | 341 | MobiDBLite | consensus disorder prediction | 76 | 154 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g2019 | Tan-Chr7:71862458 | Tan07g2021 | Tan-Chr7:71862458 | 5.60E-185 | dispersed | |
Tan07g2021 | Tan-Chr7:71862458 | Tan07g2023 | Tan-Chr7:71862458 | 5.20E-131 | dispersed | |
Tan07g2020 | Tan-Chr7:71862458 | Tan07g2021 | Tan-Chr7:71862458 | 2.80E-185 | tandem | |
Tan07g2021 | Tan-Chr7:71862458 | Tan07g2022 | Tan-Chr7:71862458 | 5.20E-131 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28025 | PF16596 | MFMR_assoc | 1.20E-45 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g2021 | K09060 | - | csv:101214217 | 583.563 |