Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2022 ATGGGTGGTAGCGAGATGAATAAACCAGAGAAGGAGGAATCCAAGACGATGCCTGCCACTACACAGGAAGAGTCTCCGAACACAAGCACAGGCGTTGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACTAGCCCCCAGGCACACCCATATATGTGGGGGGTACAGCCCATTATGCCCCCTTATGGAACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCGCCCATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATATTCCAGGCAACATGGAAGGGGATGGTAAGCCATCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATAACTGGGAAGCACAATGAGCTCAAACCATCAGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTTCAAGTGAAAGAAGTGATGCTGATTCTCAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGGGGGACTCCTAATGATTTAATGCATGGTTCTCAGAATGAAGCACATAGTCTCGCTCTCGCGCATCCATTGGTGAACCAAACAATGTCCATTATACCAATTCAACCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCAACAACTTCTGCCATCCCTTCATTGTGTGGGAAGGTTCCTTCGGCTCCGGTTGCAGGAGCTGCTGCTGCTGGGTCACGAGACAGCATTCAGTCACAGATTTGGTTACAGGTTTGGTCCAATTTTGTTGAACATTGCGCATGA 927 45.74 MGGSEMNKPEKEESKTMPATTQEESPNTSTGVVNPEWSGFQAYSPIPPPGYLATSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNIPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKHNELKPSGTSANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNDLMHGSQNEAHSLALAHPLVNQTMSIIPIQPSGAVTGPATNLNIGMDYWGTPTTSAIPSLCGKVPSAPVAGAAAAGSRDSIQSQIWLQVWSNFVEHCA 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71862458 71870506 - Tan0006773.9 Tan07g2022 759553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2022 308 MobiDBLite consensus disorder prediction 1 36 - -
Tan07g2022 308 MobiDBLite consensus disorder prediction 137 215 - -
Tan07g2022 308 MobiDBLite consensus disorder prediction 145 175 - -
Tan07g2022 308 Pfam Disordered region downstream of MFMR 134 268 - -
Tan07g2022 308 MobiDBLite consensus disorder prediction 1 18 - -
Tan07g2022 308 PANTHER G-BOX-BINDING FACTOR 3-RELATED 22 280 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Tan07g2022 308 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Tan07g2022 308 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2229 Tan-Chr1:26558044 Tan07g2022 Tan-Chr7:71862458 1.50E-66 dispersed
Tan07g2020 Tan-Chr7:71862458 Tan07g2022 Tan-Chr7:71862458 5.20E-131 dispersed
Tan07g2022 Tan-Chr7:71862458 Tan07g2024 Tan-Chr7:71862458 2.00E-174 dispersed
Tan07g2021 Tan-Chr7:71862458 Tan07g2022 Tan-Chr7:71862458 5.20E-131 tandem
Tan07g2022 Tan-Chr7:71862458 Tan07g2023 Tan-Chr7:71862458 2.00E-174 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2022 K09060 - csv:101214217 525.783