Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2039 ATGGCACCGACCCTGAACGATCACTTCATCTTTCCTACGCCAGAAAATCAGAGTGTCCAGACTAAAAAAGCTCCTCGCTCTGAACACCCCAAAAAGTATCCTGACTGGTATTCACCAGATAGAGGAATTTATCGTAGTCTTCATTCCTCCAGAGACTTGCCCTCTGACCCATTTCTTGACGTTGTCTCTTTCATCTTCTCCTTCCAACACAATGGACATTCAGCTTTCATTGATTCCTCAACTGGGCATTCAATATCTTACAGAGAATTGTTTCCTATGGTCAAGGCGATGGCTTCTGGGCTTCACAAGTTAGGTATTTCACAAGGGGATGTAGTTTTGCTTCTGTTACCTAATTCCATTTTCTATCCCATTATTTTTTTGGGTGTTCTGTATTTGGGAGCAGTTATTACGACCATGTTTCCTCAAAGCAGTTCCTCAGAAATCAAGAAACGAACGAGCGATTGCAATGTGCGTCTGGCTTTTGCAATACCTCAGAAAGTTGAGAACGTTAGAGCATTGGGAATTCAGGCAATTGGTGTACCAGAAAATGTGAATTTGGACTTGATGAGGCCTATGGGATTTTCTTCTTTTTATGAGCTTATTTCAGGTGGTTTTGATTTGATTAAAAGACCAGTGATTAAACAGCAAGATACAGCTGCTATATTATATTCTTCAGGTACTACCGGAGTCAGTAAAGGGGTTATGCTGACACACAGAAATTTCATATCCATGGTCGAGCTTTTTGTCCGGGGTGAAGCTTCACAATATGAATATTTAGCCACAGAGAATGTGTATTTAGCTGCGGTACCAATGTTTCATATATACGGTCTCTCCCTTTTTGTGATGGGATTAATGTCATTGGGCTCTAGTGTTGTTGTAATGAGCAAATTTGATGTCAAAGAGGTGGTTAATGCCATTGATAGATTTAAAGTCACACATTTTCCAGTTGTGCCGCCAATAATGACAGCTCTGGCTAAGACTGCAAAGAAAGTTGGTAGACATAGATTTCGGAGTTTGAAACAAGTTTGTTGTGGGGCTGCTTCTTTGAGCAAGAAGACCATAGAGGAATTTGTGCAGGTATTCCCTCAAGTTGACTTCATTCAGGGATATGGCATGACTGAGTCCACAGCTATAGGAACGCGAGGCTTCAATACCAAAAAGGCTCAAAATTATACGTCAGTGGGACTTTTAGCTCCAAACATGGAAGCTAAAGTAGTTGATTGGGTTAGCGGATCTTCCATGCCTCCTGGTAAAACTGGCGAACTTTGGTTACGTGGACCTGGTTCAATGAAAGGGTACTTGAATAATCCAGAGGCAACAATGTCCATGATCGACCAAGAAGACTGGCTACATACTGGTGATATCGTCTACTTTGACCAAGAAGGATACTTGTATGTTGTTGATCGTATGAAGGAGGTTATAAAATATAAAGGCTTTCAGATTGCTCCTACTGATTTAGAAGCTGTGGTGATTACACATCCAGAAGTTCTCGATGTTGCAGTAGCAGCGGCCAATGATGAAGAATGTGGAGAGATTCCAGTGGCCTTTGTCGTCAAGAAGCCAGGAAGCACACTCTCACAGAAAGATGTCATAGAGTTTGTTGCTCAACAGGTTGCACCATATAAAAAAGTCAGAAAAGTGGTTTTTACTGAAGCGATTCCGAAGTCTGCTGCTGGCAAAATACTGCGCAGGGAACTGGGGAAGCACTTGGCTTCTAGACTCTGA 1725 41.97 MAPTLNDHFIFPTPENQSVQTKKAPRSEHPKKYPDWYSPDRGIYRSLHSSRDLPSDPFLDVVSFIFSFQHNGHSAFIDSSTGHSISYRELFPMVKAMASGLHKLGISQGDVVLLLLPNSIFYPIIFLGVLYLGAVITTMFPQSSSSEIKKRTSDCNVRLAFAIPQKVENVRALGIQAIGVPENVNLDLMRPMGFSSFYELISGGFDLIKRPVIKQQDTAAILYSSGTTGVSKGVMLTHRNFISMVELFVRGEASQYEYLATENVYLAAVPMFHIYGLSLFVMGLMSLGSSVVVMSKFDVKEVVNAIDRFKVTHFPVVPPIMTALAKTAKKVGRHRFRSLKQVCCGAASLSKKTIEEFVQVFPQVDFIQGYGMTESTAIGTRGFNTKKAQNYTSVGLLAPNMEAKVVDWVSGSSMPPGKTGELWLRGPGSMKGYLNNPEATMSMIDQEDWLHTGDIVYFDQEGYLYVVDRMKEVIKYKGFQIAPTDLEAVVITHPEVLDVAVAAANDEECGEIPVAFVVKKPGSTLSQKDVIEFVAQQVAPYKKVRKVVFTEAIPKSAAGKILRRELGKHLASRL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 71948170 71962149 - Tan0001583.1 Tan07g2039 759570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2039 574 Gene3D - 472 572 IPR045851 -
Tan07g2039 574 FunFam 4-coumarate--CoA ligase 2 472 573 - -
Tan07g2039 574 CDD 4CL 53 566 - -
Tan07g2039 574 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
Tan07g2039 574 Pfam AMP-binding enzyme 70 434 IPR000873 -
Tan07g2039 574 MobiDBLite consensus disorder prediction 11 34 - -
Tan07g2039 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 49 471 - -
Tan07g2039 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 566 - GO:0005777(PANTHER)|GO:0006744(PANTHER)|GO:0016405(PANTHER)
Tan07g2039 574 SUPERFAMILY Acetyl-CoA synthetase-like 69 571 - -
Tan07g2039 574 Pfam AMP-binding enzyme C-terminal domain 486 560 IPR025110 -
Tan07g2039 574 Gene3D - 43 471 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0651 Tan-Chr4:5527129 Tan07g2039 Tan-Chr7:71948170 1.50E-114 dispersed
Tan04g0652 Tan-Chr4:5527129 Tan07g2039 Tan-Chr7:71948170 9.50E-103 dispersed
Tan07g2039 Tan-Chr7:71948170 Tan08g1857 Tan-Chr8:70812704 2.70E-108 dispersed
Tan07g2039 Tan-Chr7:71948170 Tan04g2483 Tan-Chr4:83652448 4.20E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2039 K01904 - csv:101219578 938.717