Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2065 ATGCTTAATTCCATCTTCTTCTTCTTTATTCTCTTGGCTCCCTGCAAATCTTCTGAAATTTCTGCCGGTGGTCGTAGATTGCTTCATCAGCCCTTTTTCCCACTTGATTCTGTGCCTCCGGCGGAGCCGCCGTCGCCTCCGCTGCCCCCGCCGCCGAATCCCAAGTACCCATTTTCCACTACCCCTCCTGCAACTCCTGATGGGTCTCCATTCTTTCCGACGTATCCTGGAACCCCTCCTCCTCCAACGCCGGCTAGCTTCGCGTCGTTTCCGGCGAATATTTCTTCTCTGATTCTCCCTCGTTCGTCTCACTCTGGTTCTACTTCCAAGAAGCTTGTTCCTTTGACCATTGCGGCGGTTGTTTCTGCTGTTTTGGTTGTCTGCATTGCCGGGTTTTTGTACTGTCGGCGGCGGCGGCGTGGCCGTGGGTTGGCTGATGATAAGACGTTCAGATCGGAAAATAGTAGCCGGTTGTGTCCGGTTCCGAATGAAGTCGGTAATGGAATTCCTAAGTTGAGACATCCTTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGCGATCGACGATCGTTCGGTCGGGGGAGCTCGTGTGGCTAATCCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTGAACTTCGGTCGGTCGAATGAGAAGCAGAATTGTGGAAATGGAGAAGAGAGATCAATGGGAGATGAAGAGGAAGAGGAATTTTACTCTCCTAAAGGTTCTCTCGGCGCAAATGGCTCGGGATCTCGAAGAGTGCTCGCGACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCTAGCTCGACTTCGTATTCCACATCCAGCGGTTCGGTTTCTCCGGCGAGATCGCGTTCGAAGAGTCTTTCTCTATCTCCTCCGGCGAGCTTGAGCCCTAGAAGATCTGTTCAAAATGACTCTTCTCATTTCTCTGTTTCTGCTACTGTAGCGACGGAGCAGCATTCCCCACCGTTAACGCCGCCGCTTTCCCACGGCGTAGTGGAATCGGACGAGGGCGGCAAGTCCCATTGCCCTTCTCCACTGCGTTTATCGACGGAGAAACTTCTGGAGAAGAGCTCCACCGCATCTTCTTCCCGGAGATTTTCTAATGTTTCAGTTCACAGTGCGATGTTTCCAATTTCAACAACCGATAAGGATTTGAATAATCATGATGAAACGAACAATAATCACGAAGAAGAATCTCCAAGAGAATCACGTAATTCAGATCTAGAAGACCAGTTTCCTTCTTCTCCTTGTTTATCTCCACTTTCAGATGGAATTTTCGGGCAAATTCAGATTCAATTACCGACAGTTTCAAACGTTCCCGATTCGGATTCTGATGCAAAATTTAAGCAACTTCCTTACTCCTTTACTTCATCTTCACCTTCATCATCACCGGAGAGAGTAGTTTTGGACTCATCTCCGTCAAGAACATCCATTATTTCAGATCAAAACAGGTCGACTCCGTTATCGCCGGAGAGAATTCTGATGAGTGATTCAGATTCATCAAAGAGAACTTTCGATCACTTTGATCAAGATGTTCAATCTTCTTCTGCCGACATCAATTCCACTGATGTGGGTCGACTGCAATCTCCTTCAGGTGCCTCCACTGCTCCTCAGCCACCGCCACCACCGCCACCGCCGCCGCCACCATTGGTAGCACCCCCTTTGCCAGTACGTTGGGAAATGCCCATTTCTCCTTCAACACCAATGGACCAATCCATTCCAAGGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATAATGGAGAATGTGAAAAATGTCTCGCCAATTCAGTTGCCTTCCTGCAAAAGCACTGGTGAATCATCTGAAGACACTCCAAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTGAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAGCTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATTGAAACTCTGTTTGTTGTGAACACTTCCAACTTGAAGGAGACAACTCCGCGCCCTGTGCTTCCTATACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAATCGCAGAACATTGCAATTGCGCTACGGGCGCTTAATGTGACGGTAGAAGAAGTTTGTGAAGCCCTTTTAGAAGGTAATGCCGATGCACTTGGAACGGACCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAACTAAAGGCATCCAAGGATGTCTCACCTACAAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTCCTTGATGTTCCTTTTGCATTTAAAAGGGTGGATGCAATGCTTTACATGGCAAATTTTGAGTCCGAGATCGAGTATCTAAAGAAGTCGTTCGAAAATCTTGAGACTGCTTGCGAAGAATTGAGGAATAGCAGGATGTTCTTAAAACTTTTGGAAGCTGTGCTCAAGACCGGGAATCGCATGAACGTCGGCACCAACCGTGGAGATGCTCACGCCTTCAAACTTGACACACTTCTGAAGCTCGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTCCTGCATTTTGTTGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGCAGCACGACTCAACCTCCAAACTCGAACGTTAATGACGATGTCAAATGCAGGAAACTCGGCCTACAAGTTGTTTCAGGTCTCAGCTCAGAGCTCGCCAACGTAAAGAAAGCAGCATCAATGGATTCTGACGTTCTCAGCGGCGAGGTCATCAAGCTTTCCAGAGGACTCGACAACATCAGAGAGGCTCTACGTCTAAACGAAGCAGACGGGCCAAATGAAAGCACAGAAAAGTTCTCAGAGTCAATGAGCAGATTCTTGAAAATGGCAGAAGAGGAAATCATCAGAATCCAAGCCCATGAAAGTGTTGCTTTATCATTAGTAAAGGAAATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGATTTTCTGACAATCCTGGATGGAGTCTGCAAGGAAGTCGGGATGATAAACGAGCGAACGATCGTAAGTTCGGCACATAAATTTCCAGTTCCAGTGAATCCAACAATACCACAAGCATTTCAAGCACATCAAAGAGTGCAGAAGTACAATTCATCTGATGAAGAAAGTGAATAA 3219 47.25 MLNSIFFFFILLAPCKSSEISAGGRRLLHQPFFPLDSVPPAEPPSPPLPPPPNPKYPFSTTPPATPDGSPFFPTYPGTPPPPTPASFASFPANISSLILPRSSHSGSTSKKLVPLTIAAVVSAVLVVCIAGFLYCRRRRRGRGLADDKTFRSENSSRLCPVPNEVGNGIPKLRHPSATSSEFLYLGTLVNSRAIDDRSVGGARVANPRPLDSPELHPLPPLNFGRSNEKQNCGNGEERSMGDEEEEEFYSPKGSLGANGSGSRRVLATMAAEDLLGKTSDSSSTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNDSSHFSVSATVATEQHSPPLTPPLSHGVVESDEGGKSHCPSPLRLSTEKLLEKSSTASSSRRFSNVSVHSAMFPISTTDKDLNNHDETNNNHEEESPRESRNSDLEDQFPSSPCLSPLSDGIFGQIQIQLPTVSNVPDSDSDAKFKQLPYSFTSSSPSSSPERVVLDSSPSRTSIISDQNRSTPLSPERILMSDSDSSKRTFDHFDQDVQSSSADINSTDVGRLQSPSGASTAPQPPPPPPPPPPPLVAPPLPVRWEMPISPSTPMDQSIPRAPPPLVPPLRPFIMENVKNVSPIQLPSCKSTGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNLKETTPRPVLPIPNQEIGVLDPKKSQNIAIALRALNVTVEEVCEALLEGNADALGTDLLESLLKMAPTKEEERKLKASKDVSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCSTTQPPNSNVNDDVKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREALRLNEADGPNESTEKFSESMSRFLKMAEEEIIRIQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSSAHKFPVPVNPTIPQAFQAHQRVQKYNSSDEESE 1072
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 72130335 72134978 + Tan0011648.1 Tan07g2065 759596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2065 1072 PANTHER FORMIN-RELATED 419 1069 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan07g2065 1072 MobiDBLite consensus disorder prediction 470 511 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 276 339 - -
Tan07g2065 1072 Coils Coil 789 816 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 399 424 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 39 78 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 276 363 - -
Tan07g2065 1072 Pfam Formin Homology 2 Domain 626 1021 IPR015425 -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 202 261 - -
Tan07g2065 1072 SUPERFAMILY Formin homology 2 domain (FH2 domain) 555 1032 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 526 549 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 393 435 - -
Tan07g2065 1072 Coils Coil 394 414 - -
Tan07g2065 1072 ProSiteProfiles Formin homology-2 (FH2) domain profile. 624 1047 IPR015425 -
Tan07g2065 1072 SMART it6_source 624 1036 IPR015425 -
Tan07g2065 1072 Gene3D Formin, FH2 domain 629 1042 IPR042201 -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 550 577 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 615 635 - -
Tan07g2065 1072 MobiDBLite consensus disorder prediction 470 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1726 Tan-Chr4:42192022 Tan07g2065 Tan-Chr7:72130335 1.70E-168 dispersed
Tan05g1655 Tan-Chr5:45853534 Tan07g2065 Tan-Chr7:72130335 5.40E-143 dispersed
Tan07g2065 Tan-Chr7:72130335 Tan09g0197 Tan-Chr9:10673567 6.60E-100 dispersed
Tan07g2065 Tan-Chr7:72130335 Tan01g4501 Tan-Chr1:110637190 8.10E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2065 K28090 - csv:101211678 1624.37