Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2098 ATGGGTGGCCGCACGCTGTTCACTTTGGCTGAGGTTGCCTCCCACGATAACCGCAACGACTGCTGGTTGATCATTGAAGACAAGGTATACGATGTAACAAAATTCCTTGAGGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGAATTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGCGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGTGATATCGATAGCTCGACCATTCCTGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAATTCATTATAAAGATCCTCCAGTTTCTAGCTCCCCTGGTAATTTTGGGTTTGGCTTTTGGCCTCCATCTCTATACCAAAACAACCTAA 402 45.52 MGGRTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSGIGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPEFIIKILQFLAPLVILGLAFGLHLYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 72379437 72382239 - Tan0013961.1 Tan07g2098 759629

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2098 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Tan07g2098 133 Gene3D - 3 83 IPR036400 -
Tan07g2098 133 SMART Cyt_b5_2 7 80 IPR001199 -
Tan07g2098 133 FunFam Cytochrome b5 type B 2 84 - -
Tan07g2098 133 PANTHER CYTOCHROME B5 6 126 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan07g2098 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Tan07g2098 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Tan07g2098 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Tan07g2098 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Tan07g2098 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Tan07g2098 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Tan07g2098 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 90 IPR036400 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2098 K23490 - - csv:101212882 261.922
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2098 Tan-Chr7:72379437 Tan10g0077 Tan-Chr10:1104879 1.30E-29 dispersed
Tan10g0527 Tan-Chr10:4230019 Tan07g2098 Tan-Chr7:72379437 8.70E-50 wgd
Tan06g2314 Tan-Chr6:74361886 Tan07g2098 Tan-Chr7:72379437 2.40E-47 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156