Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2098 ATGGGTGGCCGCACGCTGTTCACTTTGGCTGAGGTTGCCTCCCACGATAACCGCAACGACTGCTGGTTGATCATTGAAGACAAGGTATACGATGTAACAAAATTCCTTGAGGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGGAATTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGCGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGTGATATCGATAGCTCGACCATTCCTGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAATTCATTATAAAGATCCTCCAGTTTCTAGCTCCCCTGGTAATTTTGGGTTTGGCTTTTGGCCTCCATCTCTATACCAAAACAACCTAA 402 45.52 MGGRTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLSGIGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPEFIIKILQFLAPLVILGLAFGLHLYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 72379437 72382239 - Tan0013961.1 Tan07g2098 759629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2098 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Tan07g2098 133 Gene3D - 3 83 IPR036400 -
Tan07g2098 133 SMART Cyt_b5_2 7 80 IPR001199 -
Tan07g2098 133 FunFam Cytochrome b5 type B 2 84 - -
Tan07g2098 133 PANTHER CYTOCHROME B5 6 126 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan07g2098 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Tan07g2098 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Tan07g2098 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Tan07g2098 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Tan07g2098 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Tan07g2098 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Tan07g2098 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 90 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2098 Tan-Chr7:72379437 Tan10g0077 Tan-Chr10:1104879 1.30E-29 dispersed
Tan10g0527 Tan-Chr10:4230019 Tan07g2098 Tan-Chr7:72379437 8.70E-50 wgd
Tan06g2314 Tan-Chr6:74361886 Tan07g2098 Tan-Chr7:72379437 2.40E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2098 K23490 - csv:101212882 261.922