Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g2128 | ATGGCGGTTTCTCTTAGACTACAGCTTTCCGCCGCTTCTTCGTTGCTCATTCTTCTTCTCAACATCCTCTTCGTTCATTTTAGTTTTGCTGGAGATGAGAGATTTCAGAGCTTCAATTCTTCATCAATGGCGGACCGGTATGTTAAGAATGAACATGCTGTTGATAATCCAGAGGAAATTGCATCAATGGTTGATTCGAGCATTCGCAACAGCACAGAGAGAAGGAATTTGGGGTTCTTCTCTTGCGGAACAGGAAATCCAATTGATGATTGTTGGCGTTGTGACCCACGTTGGCAACTTCGCCGCAAGCACCTGGCAGATTGCGGCATCGGATTCGGTCGCAACGCTGTCGGTGGCCGTGATGGGCGATACTACGTCGTTTCAGATCCCGGCGACGACGACCCTGTCAATCCCAGACCAGGAACCCTCCGCCACGCCGTGATTCAAGACAGGCCATTGTGGATCGTGTTCAAAAGAGACATGGTCATCACTCTAAAGCAAGAACTCATCATGAACAGCTTCAAGACAATCGATGCCCGTGGAGCTAATGTCCACATTGCCTATGGCGCCTGCATTACAATCCAATTTGTAACCAATGTCATTATTCATGGCTTGCACATTCATGACTGCAAGCCAACGGGGAACGCCATGGTTCGAAGCTCCCCTAGTCATTATGGATGGAGGACAATGGCGGATGGTGATGGGATTTCCATTTTTGGGTCGAGTCATATTTGGATCGACCATAATTCTCTTTCTAGCTGTGCTGATGGGCTCATTGATGCTGTGATGGGATCAACTGCCATTACCATTTCTAACAACTACTTCACCCATCACAATGAGGTGATGCTTTTGGGACATAGTGACTCTTATGTTAGAGACAAGCAAATGCAAGTGACCATAGCTTATAACCATTTTGGTGAAGGTCTCATCCAAAGAATGCCGAGGTGTAGACATGGGTATTTCCATGTAGTAAACAATGACTACACTCATTGGGTAATGTATGCCATTGGTGGAAGTGCTGATCCCACCATTAATAGCCAAGGCAACAGATATCTTGCCCCTGCCAACCCTTTTGCCAAAGAGGTCACAAAGAGAGTCGACACGTGGAACGGTGTATGGAAGCACTGGAACTGGAGATCAGAGGGAGATCTTATGCTAAATGGAGCCTATTTCACTCCCTCAGGAGCTGGTGCAGCAGCCAGTTATGCAAGAGCCTCAAGCTTAGGAGCCAAATCCTCTTCCTTAGTGGGCTCCATTACTTCATCTGCAGGTGCCCTTTCTTGTCGCAGGGGATACCGTTGTTAA | 1305 | 47.43 | MAVSLRLQLSAASSLLILLLNILFVHFSFAGDERFQSFNSSSMADRYVKNEHAVDNPEEIASMVDSSIRNSTERRNLGFFSCGTGNPIDDCWRCDPRWQLRRKHLADCGIGFGRNAVGGRDGRYYVVSDPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDARGANVHIAYGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQGNRYLAPANPFAKEVTKRVDTWNGVWKHWNWRSEGDLMLNGAYFTPSGAGAAASYARASSLGAKSSSLVGSITSSAGALSCRRGYRC | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 72582443 | 72587291 | + | Tan0011508.1 | Tan07g2128 | 759659 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g2128 | 434 | SUPERFAMILY | Pectin lyase-like | 63 | 429 | IPR011050 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 168 | 184 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 376 | 400 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 405 | 428 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 232 | 253 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 108 | 125 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 312 | 331 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 132 | 157 | IPR018082 | - | |
Tan07g2128 | 434 | PRINTS | Pollen allergen Amb family signature | 334 | 353 | IPR018082 | - | |
Tan07g2128 | 434 | PANTHER | PECTATE LYASE 18-RELATED | 24 | 431 | IPR045032 | GO:0030570(InterPro) | |
Tan07g2128 | 434 | SMART | amb_all | 160 | 357 | IPR002022 | - | |
Tan07g2128 | 434 | FunFam | Pectate lyase | 85 | 427 | - | - | |
Tan07g2128 | 434 | Gene3D | - | 85 | 427 | IPR012334 | - | |
Tan07g2128 | 434 | Pfam | Pectate lyase | 180 | 349 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g3352 | Tan-Chr5:85315597 | Tan07g2128 | Tan-Chr7:72582443 | 5.10E-79 | dispersed | |
Tan07g1259 | Tan-Chr7:56526653 | Tan07g2128 | Tan-Chr7:72582443 | 8.60E-131 | dispersed | |
Tan07g1262 | Tan-Chr7:56607071 | Tan07g2128 | Tan-Chr7:72582443 | 2.70E-132 | dispersed | |
Tan07g2128 | Tan-Chr7:72582443 | Tan10g0580 | Tan-Chr10:4745473 | 6.40E-195 | dispersed | |
Tan11g0685 | Tan-Chr11:5943029 | Tan07g2128 | Tan-Chr7:72582443 | 1.30E-168 | transposed | |
Tan10g0579 | Tan-Chr10:4745473 | Tan07g2128 | Tan-Chr7:72582443 | 1.90E-202 | wgd | |
Tan06g2325 | Tan-Chr6:74602422 | Tan07g2128 | Tan-Chr7:72582443 | 6.00E-204 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g2128 | K01728 | - | csv:101207204 | 824.313 |