Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2156 ATGGCAGAAATGGCCTGCTCCGTCGCCGACCTCCGCCACCTCCTCGGCGGCTCAGCCAACGCCACTGCTGCCGCCGAGTACATTTGCGGGCGATTCGAGGCGGTTTCGACCAAATTTGTGGACACAACTTATGCTGTTGATAACACTTACCTTCTGTTTTCAGCCTACCTTGTTTTTGCAATGCAGCTTGGATTTGCAATGCTTTGTGCTGGTTCTGTTAGAGCGAAAAATACAATGAATATTATGCTTACTAATGTTCTTGATGCTGCCACTGGTGGCATTTTTTATTATGTCTTTGGCTTTGCTTTGGCCTTTGGAACTCCTTCTACTGGCTTCATTGGCCACCATTATTTTGGCCTCTCTCAGTTTCCTTCTTCTTCGTTTGATTATGGGTTCTTTCTGTTTCAATGGGCTTTCGCCATTGCTGCTGCTGGAATTACCAGTGGCTCCATTGCTGAACGGACCCAGTTTGTTGCTTATTTGATCTATTCCTCTGTCTTGACTGGTTTGGTTTATCCAATCGTCTCTCATTGGTTTTGGTCTGCCGACGGGTGGGGTAGCGCAGCTCGATCGGAGAATCTCCTGTTTGGTTCAGGAGTGATCGACTTCGCCGGCTCCGGCGTGGTCCACATGGTCGGCGGCATCGCCGGTTTATGGGGCGCCGTCATAGAAGGCCCTCGAATCGGCCGGTTCGATCACGCTGGCCGGTCCGTCGCCCTCCGTGGCCACAGCGGCACATTAGTCGTTCTCGGCACTTTCCTCCTCTGGTTCGGCTGGTACGGCTTCAACCCCGGTTCATTTCTCAACATCCTCAAAGCCTACGGCACCACCACCGCCGCCCCCTTTTACGGGCAATGGAGCGCCATTGGCCGCACGGCCGTCACCACCACCCTCGCCGGCTGCACGGCGGCGCTAACCACACTCTTCGGCAAACGCCTCCTTGTCGGCCACTGGAATGTCACCGACGTCTGCAACGGCCTGCTAGGCGGATTCGCCGCCATAACTTCCGGCTGCGCAGTGGTGGATCCATGGGCGGCGATCGTTTGCGGGTTTTTCGCGGCCTGGGTTTTGATCGGATTCAACAGACTAGCGGAGAAAGTGAAGTACGACGATCCGTTAGAGGCAGCGCAATTGCACGGCGGCTGTGGGGCTTGGGGGATTTTGTTCACAGGCTTGTTTGCAAAACAGGCTTATGTTAACGAGATTTATCCGGGGTTGCCGGAGAGGCCGTACGGGTTACTGATGGGCGGTGGCGGAAGGCTGCTGGCGGCTCATTTGGTGCAAATTCTGTCGATTGTTGGTTGGGTTAGTTTGACGATGGGGTTGGTTTTTTGGCTGTTGCATAGGTTTGAGTTGCTGAGGATCAAGGCGGAGGAGGAGATGGCCGGAATGGACTTGACGAGTCACGGTGGATTGGCTTATGTGTATAATGATGAAGAGAAGCCTTATGTTTGA 1455 53.95 MAEMACSVADLRHLLGGSANATAAAEYICGRFEAVSTKFVDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYVFGFALAFGTPSTGFIGHHYFGLSQFPSSSFDYGFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGLVYPIVSHWFWSADGWGSAARSENLLFGSGVIDFAGSGVVHMVGGIAGLWGAVIEGPRIGRFDHAGRSVALRGHSGTLVVLGTFLLWFGWYGFNPGSFLNILKAYGTTTAAPFYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVTDVCNGLLGGFAAITSGCAVVDPWAAIVCGFFAAWVLIGFNRLAEKVKYDDPLEAAQLHGGCGAWGILFTGLFAKQAYVNEIYPGLPERPYGLLMGGGGRLLAAHLVQILSIVGWVSLTMGLVFWLLHRFELLRIKAEEEMAGMDLTSHGGLAYVYNDEEKPYV 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 73198943 73201419 - Tan0014462.1 Tan07g2156 759687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2156 484 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan07g2156 484 SUPERFAMILY Ammonium transporter 44 455 - -
Tan07g2156 484 Pfam Ammonium Transporter Family 50 474 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Tan07g2156 484 FunFam Ammonium transporter 28 483 - -
Tan07g2156 484 Gene3D Ammonium transporter AmtB like domains 28 483 IPR029020 -
Tan07g2156 484 PANTHER AMMONIUM TRANSPORTER 31 479 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Tan07g2156 484 NCBIfam ammonium transporter 47 474 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2156 Tan-Chr7:73198943 Tan08g1053 Tan-Chr8:18443531 3.40E-205 dispersed
Tan10g0608 Tan-Chr10:4967294 Tan07g2156 Tan-Chr7:73198943 3.20E-198 wgd
Tan06g2341 Tan-Chr6:75480335 Tan07g2156 Tan-Chr7:73198943 6.90E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2156 K03320 - csv:101223077 895.96