Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2168 ATGAAGTTGAAAACCCAGATTTTGTTTTGTGTATTTTTGTACTGTTGGATTGGTTTTTGTACCGAGTGTTCTGCTGCTGGGTTTAGTGAAGAAGCTTTGGCTTTGGTTTCGTTTAAATCAGGGCTTGTTGATCCGTTGAAATGGCTTAGAGATTGGAAGTTGGGCGATGGAAATGGGAGATTTGCAGGGCACTGTCATTGGACTGGAGTTTTTTGCAACTCAGATGGAGCTGTTGAGAAACTGAGCCTTTCTCGTATGAATCTCAGTGGCATTTTGTCGAATGACTTGCAGACACTAACAAGGCTTAGTTCTCTCGATTTGAGTTGCAATGGATTTTCGTCTTCTTTGCCAAAATCTATTGGGAATCTCACTTCCTTGAAGAGTTTTGATGTGAGTCAAAACTTTTTTGTTGGTGAGATTCCTGTGGGGTTTGGGAAGATGGTTGGATTGATGAACTTCAATGCCTCAAGCAACAATTTCTCTGGTTTAATCCCTGAAGATCTTGGAAATGCAACTCTGCTGGAGATTTTGGATCTCCGGGGGAGTTTTCTTGAAGGCTCAATTCCTGTATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGACTTTCTGGGAATAATCTGACCGGTCGAATCCCGGCCGAGATTGGTCAGATGTCGTCTTTAGAGACAGTTATTATTGGATACAATGAGTTTGAAGGAGGGATTCCATCAGAATTTGGAAATCTCACCAATCTGAAGTATCTTGATTTGGCTGTGGGAAATCTTGGTGGTGGCATTCCTGCTGAGCTTGGGAGGCTTAAGCAACTTGAGACATTGTTCCTTTATAAGAACGAATTCGAAGAGCGAATTCCGTCGTCGATTGGCAATGCTACTTCATTGGTGTTTCTTGATCTTTCAGACAACAAGTTGACAGGGGAAATTCCAGCTGAGGTTGCTGAATTGAAGAATTTGCAGCTGCTGAATCTAATGTGTAACAAGCTGTCTGGTGAAGTACCTTCAGGGATTGGAGGGTTGACAAAATTGCAGGTTCTAGAGCTATGGAACAACTCTTTTTCAGGCCAACTACCGGGCGATCTCGGTAAGAACTCGGAGTTGGTTTGGTTGGATGTCTCATCCAATTCATTCTCTGGTCCAATTCCTGCTTCTTTATGCAACTGGGGCAATCTAACCAAGCTCATTCTTTTTAACAATGCCTTTTCCGGTCCAATTCCGATTGGATTATCGTCATGTTACTCCCTCGTTCGTGTTCGAATGCAGAACAATTTGCTATCTGGTACAATCCCAGTTGGTTTTGGAAAGCTTGGGAAACTTCAAAGGCTAGAATTAGCAAACAATAGTCTCATTGGCAGTATCCCAAGTGATATTTCATCTTCTAAATCCCTTTCTTTTATTGATCTCTCTGAAAATAACCTTCATTCTCCTCTTCCTTCCTCAATTCTTTCCATTCCAAATCTTCAAACTTTTATAGTCTCTGACAATAACTTAGAAGGTGAAATTCCAGACCAGTTTCAGGATTGTCCTGCACTTTCTGTTCTTGATCTCTCTTCGAACCGTTTTGCTGGCAGCATTCCAGAAAGCATTGCTTCATGTGAGAGATTGGTAGATCTGAATCTCAGAAACAACCAGTTAACTGGAGAAATCCCAAAACAGATTGCAAACATGCCTTCCTTGTCAGTTCTCGATCTATCCAACAACTCTCTTACCGGTAGAATACCCGACAATTTCGGTATCTCTCCTGCTCTGGAATCGCTCAATGTATCATACAATAAGCTCGAGGGTCCAGTGCCATTAAATGGTGTGTTAAGAACAATCAATCCAAGTGATCTTCAGGGCAATGCTGGTCTATGTGGAGCTGTCCTACCTCCATGTTCACCAAATTCAGCATTTACATCAGGGCACGGGAACTCGCACACGACGCACATTATTGCCAGTTGGGTCATCGGAATATCTTCAGTTTTAGCAATCTGTATCGCTCTTTTCGGTGTTCGATCATTGTACAAGAAGTGGTATTCAAGTGGAAGTTGCTTTGAAGGGAGATATGAAATGGGTGGTGGAGATTGGCCATGGAGACTGATGGCATTTCAAAGGCTTGGATTCACAAGCAGTGACATTTTGGCTTGCATCAAGGAATCAAATGTAATTGGAATGGGAGCAACTGGGATTGTGTATAAAGCTGAAATGCCACAGCTAAAGACAGTTGTGGCAGTCAAAAAGCTATGGAGATCAGAACCAGATCTTGAAATGGGAAGCAGTGAAGGTCTAGTAGGAGAAGTGAATTTGCTGGGGAAGTTAAGGCACAGGAACATAGTTCGTTTACTCGGGTTTATGCATAATGATGTCGATGTAATGATCGTCTACGAGTTTATGCAAAATGGAAGCCTTGGAGAAGCCTTGCATGGTAAACAAGCAGGGAAGCTGCTTGTGGACTGGGTTTCAAGATACAACATAGCAATTGGAGTTGCGCAAGGGTTAGCTTATCTCCACCATGATTGCAACCCACCCATCATTCATCGAGACGTTAAGCCAAATAATATACTTCTCGATTCAAATCTTGAAGCACGGTTAGCTGATTTCGGGTTGGCACGGATGATGGCTCGAAAGAACGAGACGGTTTCAATGGTAGCTGGATCCTATGGCTACATCGCCCCTGAATATGGATACACTTTAAAGGTGGATGAAAAGATTGACATTTACAGCTACGGAGTCGTTCTTTTAGAACTACTGACAGGGAAGAAGCCATTAGATCCCGTGTTTGGAGAATCCATGGACATTGTTGAATGGATTAGAAGGAAGGTTAGAGACAACAGATCTTTAGAAGAAGCACTAGATCCCAATTTGGGAAATTTCAAGCATGTTCAAGAAGAAATGCTGTTTGTTCTTAGAATAGCACTTCTCTGCACTGCAAAGCATCCAAAAGACAGGCCATCCATGAGAGATATAATAACAATGCTTGGAGAAGCAAAACCAAGGAGAAAAAGCAACAGTGGCAATGAAGGATTTGGAACTAACAAAGAGAAGCCAGTTTTCAGCACTTCCCCTGTAAATGGCCTTCTGTAG 3060 42.32 MKLKTQILFCVFLYCWIGFCTECSAAGFSEEALALVSFKSGLVDPLKWLRDWKLGDGNGRFAGHCHWTGVFCNSDGAVEKLSLSRMNLSGILSNDLQTLTRLSSLDLSCNGFSSSLPKSIGNLTSLKSFDVSQNFFVGEIPVGFGKMVGLMNFNASSNNFSGLIPEDLGNATLLEILDLRGSFLEGSIPVSFKNLQKLKFLGLSGNNLTGRIPAEIGQMSSLETVIIGYNEFEGGIPSEFGNLTNLKYLDLAVGNLGGGIPAELGRLKQLETLFLYKNEFEERIPSSIGNATSLVFLDLSDNKLTGEIPAEVAELKNLQLLNLMCNKLSGEVPSGIGGLTKLQVLELWNNSFSGQLPGDLGKNSELVWLDVSSNSFSGPIPASLCNWGNLTKLILFNNAFSGPIPIGLSSCYSLVRVRMQNNLLSGTIPVGFGKLGKLQRLELANNSLIGSIPSDISSSKSLSFIDLSENNLHSPLPSSILSIPNLQTFIVSDNNLEGEIPDQFQDCPALSVLDLSSNRFAGSIPESIASCERLVDLNLRNNQLTGEIPKQIANMPSLSVLDLSNNSLTGRIPDNFGISPALESLNVSYNKLEGPVPLNGVLRTINPSDLQGNAGLCGAVLPPCSPNSAFTSGHGNSHTTHIIASWVIGISSVLAICIALFGVRSLYKKWYSSGSCFEGRYEMGGGDWPWRLMAFQRLGFTSSDILACIKESNVIGMGATGIVYKAEMPQLKTVVAVKKLWRSEPDLEMGSSEGLVGEVNLLGKLRHRNIVRLLGFMHNDVDVMIVYEFMQNGSLGEALHGKQAGKLLVDWVSRYNIAIGVAQGLAYLHHDCNPPIIHRDVKPNNILLDSNLEARLADFGLARMMARKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDPVFGESMDIVEWIRRKVRDNRSLEEALDPNLGNFKHVQEEMLFVLRIALLCTAKHPKDRPSMRDIITMLGEAKPRRKSNSGNEGFGTNKEKPVFSTSPVNGLL 1019
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 73265223 73269118 + Tan0020802.1 Tan07g2168 759699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2168 1019 SUPERFAMILY Protein kinase-like (PK-like) 708 985 IPR011009 -
Tan07g2168 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 28 182 - -
Tan07g2168 1019 FunFam MDIS1-interacting receptor like kinase 1 794 1003 - -
Tan07g2168 1019 FunFam Leucine-rich repeat receptor protein kinase EMS1 284 366 - -
Tan07g2168 1019 Gene3D Ribonuclease Inhibitor 366 628 IPR032675 -
Tan07g2168 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 367 628 - -
Tan07g2168 1019 Gene3D Phosphorylase Kinase; domain 1 709 793 - -
Tan07g2168 1019 Pfam Leucine rich repeat 484 544 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Tan07g2168 1019 PRINTS Leucine-rich repeat signature 294 307 - -
Tan07g2168 1019 PRINTS Leucine-rich repeat signature 555 568 - -
Tan07g2168 1019 SMART serkin_6 709 985 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g2168 1019 SUPERFAMILY RNI-like 284 594 - -
Tan07g2168 1019 Gene3D Ribonuclease Inhibitor 27 180 IPR032675 -
Tan07g2168 1019 MobiDBLite consensus disorder prediction 986 1019 - -
Tan07g2168 1019 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 988 IPR050647 -
Tan07g2168 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 183 283 - -
Tan07g2168 1019 SUPERFAMILY L domain-like 65 353 - -
Tan07g2168 1019 Gene3D Transferase(Phosphotransferase) domain 1 794 1006 - -
Tan07g2168 1019 Pfam Protein kinase domain 711 982 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g2168 1019 ProSitePatterns Protein kinases ATP-binding region signature. 715 739 IPR017441 GO:0005524(InterPro)
Tan07g2168 1019 FunFam MDIS1-interacting receptor like kinase 1 709 793 - -
Tan07g2168 1019 Pfam Leucine Rich Repeat 102 123 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 341 362 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 197 219 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 557 577 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 366 387 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 293 313 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 437 458 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 Pfam Leucine Rich Repeat 317 339 IPR001611 GO:0005515(InterPro)
Tan07g2168 1019 MobiDBLite consensus disorder prediction 996 1019 - -
Tan07g2168 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g2168 1019 Gene3D Ribonuclease Inhibitor 181 281 IPR032675 -
Tan07g2168 1019 Gene3D Ribonuclease Inhibitor 287 365 IPR032675 -
Tan07g2168 1019 SMART LRR_typ_2 555 579 IPR003591 -
Tan07g2168 1019 SMART LRR_typ_2 483 506 IPR003591 -
Tan07g2168 1019 SMART LRR_typ_2 267 291 IPR003591 -
Tan07g2168 1019 SMART LRR_typ_2 435 459 IPR003591 -
Tan07g2168 1019 SMART LRR_typ_2 339 363 IPR003591 -
Tan07g2168 1019 SMART LRR_typ_2 99 123 IPR003591 -
Tan07g2168 1019 SMART LRR_typ_2 195 219 IPR003591 -
Tan07g2168 1019 ProSiteProfiles Protein kinase domain profile. 709 992 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0415 Tan-Chr1:3797135 Tan07g2168 Tan-Chr7:73265223 1.00E-100 dispersed
Tan07g2168 Tan-Chr7:73265223 Tan11g1091 Tan-Chr11:8638157 3.60E-79 dispersed
Tan07g2168 Tan-Chr7:73265223 Tan03g1728 Tan-Chr3:73213135 3.40E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67891 PF00069 Pkinase 7.40E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2168 - - - 0.0