Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2189 ATGGTTTCCATTATTCTTGCAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCGGAAGGCTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGAGACAGTGACAAAGGCCGTCGAGCTGCTACCAGAACTATGGAAACTAGGTGATTCTTCTCAAGAAGCGATCCTTTCATATCGGCGGGCACTCCTTCATCAGTGGAACCTTGATGCAGGAACCATTGCTCGAATTCAGAAAGAGTTCGCCATTTTTCTTCTGTACAGTGGAAGTGAAGCATGCCCTCCAAATCTCCGCTCCCAAATGGACAGCTCATTTGTACCAAAAAACAACATTGAAGAAGCTATACTCTTATTTATGATACTACTTAGAAAAGTTGTTCTTAAAAGGATTGAATGGGATCCTTCAATCTTGGATCACCTCTCCTTTGCTCTAACAATATCAGGGGATACAAGGGCTTTGGCAGGTCAAATAGAGGAATTGCCTCCTGGGATTCTACATCGAAAAGATAGGTACCGTGCTCTGGCTCTTTGTTACTATGGAGCAGGCGAAGACTTGTCTGCTTTGAATCTTTTGAGGAAATTGTTGGGTAGTCACGAGGATCCTAAATCTCTTCCCGCTTTATTAATGGCATCGAAGATTTGTGGAGAGCACTGTGATCTTGCTGAAGAAGGAACAAGTTATGCTTGTAGAGCTCTTCAAAACTTGGATGCTGGATGCGATCAATTGGAAGGTGCTGCCAACTGTTTATTGGGTGTCTCACTGTCTGTATCTTCTAAATCAGCCATTGCAGATTCCGAGCGGTCCACCAGACAGTCTGAGGCGATAGAGGCCCTGGAAGCTGCCCGGAAGATGACTAGAATGACCGACCCTAACGTTCTCTATCATTTGAGTCTTGAATACGCCAATGAGAGGAAGTTGGAATCAGCACTTCATTATGCGAAAGAGTGTCTCAAACTGGAAGGTGGATCTAATGTTAGAACTTGGTTACTGCTGGCTAGGATTCTCTCTGCCCAAAAACGATTTACGGATGGCGAAACTATTGTAAACGCAGCTCTGGAGCAGACTGGGAAATGGGATCAAGGTGAATTGCTTCGAACGAAAGCAAAGCTTCTGATTGCACAGGATGATTTGAAAGGTGCTATTGGGACTTATACTCACCTTCTCGCTGTTTTTCAAGTTCAGAGTAAAAGTTTTGGCTTGGGAGATAAGAAGCTATATAAGAGCAGCAGAAATTATGTTAGAAGTTTGCAATTGGAAGTGTGGCATGATTTAGCTCTAGTCTATATAAGGCTCTCACAGTGGCACGATGCTGAGGCCTGTCTTTCAAAATCGAAGGCCATCCGCTCTCATTCAGCTTCTAGATGTCACATAACAGGTATGCTTTATGAAGCAAAATGCTTGTATAAAGAAGCTCTGAAAGCTTTTATGACTGCTCTAGACATCGATCCCGTTCATGTCCCGAGCTTGGTTTCGTCTGCCGTGGTTATTAGACATCTCGGCCACCGATCGCATCCCGTTATTCGCAGCTTTTTGATGGAAGCGTTACGGCTTGACCAGACGAACCACGCTGCGTGGTACAATCTCGGGCTATTCTACAAATCTGAAGGAACCAAGTCTTCATTGGCAGAAGCTGTTGAATGTTTTGAGGCTGCTACTTTTCTTGAAGAGTCTGCTCCTGTTGAACCCTTTAGATAA 1716 44.0 MVSIILAEAAQSCKVILDILESSFPEGLPENFGADCKLQETVTKAVELLPELWKLGDSSQEAILSYRRALLHQWNLDAGTIARIQKEFAIFLLYSGSEACPPNLRSQMDSSFVPKNNIEEAILLFMILLRKVVLKRIEWDPSILDHLSFALTISGDTRALAGQIEELPPGILHRKDRYRALALCYYGAGEDLSALNLLRKLLGSHEDPKSLPALLMASKICGEHCDLAEEGTSYACRALQNLDAGCDQLEGAANCLLGVSLSVSSKSAIADSERSTRQSEAIEALEAARKMTRMTDPNVLYHLSLEYANERKLESALHYAKECLKLEGGSNVRTWLLLARILSAQKRFTDGETIVNAALEQTGKWDQGELLRTKAKLLIAQDDLKGAIGTYTHLLAVFQVQSKSFGLGDKKLYKSSRNYVRSLQLEVWHDLALVYIRLSQWHDAEACLSKSKAIRSHSASRCHITGMLYEAKCLYKEALKAFMTALDIDPVHVPSLVSSAVVIRHLGHRSHPVIRSFLMEALRLDQTNHAAWYNLGLFYKSEGTKSSLAEAVECFEAATFLEESAPVEPFR 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 73379230 73383810 - Tan0011005.2 Tan07g2189 759720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2189 571 SUPERFAMILY TPR-like 278 397 IPR011990 GO:0005515(InterPro)
Tan07g2189 571 SMART tpr_5 425 458 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 SMART tpr_5 529 565 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 SMART tpr_5 332 365 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 SMART tpr_5 297 330 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 SMART tpr_5 459 492 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 SMART tpr_5 368 401 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 PANTHER PROTEIN NPG1 7 571 IPR043376 -
Tan07g2189 571 Gene3D Tetratricopeptide repeat domain 423 567 IPR011990 GO:0005515(InterPro)
Tan07g2189 571 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515(InterPro)
Tan07g2189 571 SUPERFAMILY TPR-like 369 543 IPR011990 GO:0005515(InterPro)
Tan07g2189 571 Gene3D Tetratricopeptide repeat domain 38 422 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2189 Tan-Chr7:73379230 Tan10g0657 Tan-Chr10:5311663 1.20E-193 dispersed
Tan07g2188 Tan-Chr7:73379230 Tan07g2189 Tan-Chr7:73379230 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2189 K21843 - csv:101223229 981.859