Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2222 ATGGAATCCTCTTACTTTTCGTTCTCCGATTCTGATTTCTCGACGGAATCTTCATTCGGATCACCGGAGGAATCGACGTTCTCATGGAGCGAATTTTTCTCGATCCACAGTGCCCTAGAAAACTCACTCTCACTGCCGGATGAGTTTCTCGGCAATCGAACACCGGAATCGGAATCGAAGATTGTGGTGAAGGAAGAAATCGAAGTGAGTTCGATAGATTTCGAGGAGGAGAAAGAGAAGAAGACGACGGAAAAGAGTTACAGAGGAGTGAGGAGGCGGCCATGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGGCATGGAGTTAGGGTTTGGCTTGGGACTTTCGATAGCGCCGAAGCCGCCGCTTTAGCGTACGATCAAGCGGCATTTTCGATGAGAGGAGCACTGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGAGAATCACTTCAGGACATTAAGTATCAATTGGAAGAAGGATGCTCACCGGTGGTGGCTTTGAAGAGAAAACACTCACTAAGAAGGAAGTCGGCGGTGGCGGCGGCGAAAAGCCAAGGGGTGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGTGATAGTAGTAGTATCAGTATGAGTCCTTTCTGA 696 47.84 MESSYFSFSDSDFSTESSFGSPEESTFSWSEFFSIHSALENSLSLPDEFLGNRTPESESKIVVKEEIEVSSIDFEEEKEKKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGALAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSAVAAAKSQGVVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCDSSSISMSPF 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 73655817 73656715 - Tan0020684.1 Tan07g2222 759753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2222 231 Gene3D AP2/ERF domain 85 146 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 PANTHER DNA-BINDING DOMAIN 42 188 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Tan07g2222 231 CDD AP2 87 145 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 ProSiteProfiles AP2/ERF domain profile. 86 144 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 Pfam AP2 domain 86 136 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 SMART rav1_2 86 150 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g2222 231 MobiDBLite consensus disorder prediction 1 25 - -
Tan07g2222 231 FunFam Ethylene-responsive transcription factor 2 85 146 - -
Tan07g2222 231 SUPERFAMILY DNA-binding domain 86 146 IPR016177 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1086 Tan-Chr6:10485883 Tan07g2222 Tan-Chr7:73655817 9.10E-44 dispersed
Tan07g2222 Tan-Chr7:73655817 Tan10g0691 Tan-Chr10:5681394 2.50E-20 dispersed
Tan10g0689 Tan-Chr10:5627998 Tan07g2222 Tan-Chr7:73655817 2.40E-44 wgd
Tan06g2418 Tan-Chr6:76662959 Tan07g2222 Tan-Chr7:73655817 4.40E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28046 PF00847 AP2 1.30E-14 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2222 K14516 - csv:101220325 299.286