Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g2222 | ATGGAATCCTCTTACTTTTCGTTCTCCGATTCTGATTTCTCGACGGAATCTTCATTCGGATCACCGGAGGAATCGACGTTCTCATGGAGCGAATTTTTCTCGATCCACAGTGCCCTAGAAAACTCACTCTCACTGCCGGATGAGTTTCTCGGCAATCGAACACCGGAATCGGAATCGAAGATTGTGGTGAAGGAAGAAATCGAAGTGAGTTCGATAGATTTCGAGGAGGAGAAAGAGAAGAAGACGACGGAAAAGAGTTACAGAGGAGTGAGGAGGCGGCCATGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGGCATGGAGTTAGGGTTTGGCTTGGGACTTTCGATAGCGCCGAAGCCGCCGCTTTAGCGTACGATCAAGCGGCATTTTCGATGAGAGGAGCACTGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGAGAATCACTTCAGGACATTAAGTATCAATTGGAAGAAGGATGCTCACCGGTGGTGGCTTTGAAGAGAAAACACTCACTAAGAAGGAAGTCGGCGGTGGCGGCGGCGAAAAGCCAAGGGGTGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGTGATAGTAGTAGTATCAGTATGAGTCCTTTCTGA | 696 | 47.84 | MESSYFSFSDSDFSTESSFGSPEESTFSWSEFFSIHSALENSLSLPDEFLGNRTPESESKIVVKEEIEVSSIDFEEEKEKKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGALAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSAVAAAKSQGVVEKKKMKKKNNVVILEDLGTEYLEELLMLSSCDSSSISMSPF | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 73655817 | 73656715 | - | Tan0020684.1 | Tan07g2222 | 759753 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g2222 | 231 | Gene3D | AP2/ERF domain | 85 | 146 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | PANTHER | DNA-BINDING DOMAIN | 42 | 188 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Tan07g2222 | 231 | CDD | AP2 | 87 | 145 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | ProSiteProfiles | AP2/ERF domain profile. | 86 | 144 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | PRINTS | Ethylene responsive element binding protein signature | 87 | 98 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | PRINTS | Ethylene responsive element binding protein signature | 110 | 126 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | Pfam | AP2 domain | 86 | 136 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | SMART | rav1_2 | 86 | 150 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan07g2222 | 231 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Tan07g2222 | 231 | FunFam | Ethylene-responsive transcription factor 2 | 85 | 146 | - | - | |
Tan07g2222 | 231 | SUPERFAMILY | DNA-binding domain | 86 | 146 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1086 | Tan-Chr6:10485883 | Tan07g2222 | Tan-Chr7:73655817 | 9.10E-44 | dispersed | |
Tan07g2222 | Tan-Chr7:73655817 | Tan10g0691 | Tan-Chr10:5681394 | 2.50E-20 | dispersed | |
Tan10g0689 | Tan-Chr10:5627998 | Tan07g2222 | Tan-Chr7:73655817 | 2.40E-44 | wgd | |
Tan06g2418 | Tan-Chr6:76662959 | Tan07g2222 | Tan-Chr7:73655817 | 4.40E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28046 | PF00847 | AP2 | 1.30E-14 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g2222 | K14516 | - | csv:101220325 | 299.286 |