Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2229 ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGATGTGTTTTTGCTCCTTATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAGGTCTTTGGAGCTAGCAATGTCTCTAAGCTTCTTGCTCGTCTCCCTCTTACTGAGCGCTGTGAGGCTGCTGTTACCATTTCTTATGAAGCTCAAGCTCGCCTTCAAGATCCTATCTATGGCTGCGTTTCTCATATCTTTGCCCTTCAACAGCAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTCTCAAGGAACAAGCAGCTGAAAGCATTAATATTATGAACAGCTCTGGCAATGGAGGCGTGGTGAATGAGAAGAATTGCAGAAAGGCTCCTTCTCATTTCCAAGATCTCCATAACTGGTTTCAATCGGAGCATCCGACCGAGTTCAATCCGAACCCAACTCAGAATTCAGCATCAAACCCTTATTATGATGAGAATTATAGGATTATGGTTAATAATAATTCTCAGTCCAATGGGAACTATGAACATCAAATGGCTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACTTCAGGCTATTCCATGTATACTCTTGATCACCTCCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTGCAATCAGTTGCTTTTGGCAATAGTACTCGACATTGGTGA 726 42.01 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESINIMNSSGNGGVVNEKNCRKAPSHFQDLHNWFQSEHPTEFNPNPTQNSASNPYYDENYRIMVNNNSQSNGNYEHQMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNSTRHW 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 73735870 73737059 + Tan0015623.1 Tan07g2229 759760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2229 241 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Tan07g2229 241 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Tan07g2229 241 Coils Coil 87 114 - -
Tan07g2229 241 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 232 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1134 Tan-Chr6:11283057 Tan07g2229 Tan-Chr7:73735870 5.40E-42 dispersed
Tan07g2229 Tan-Chr7:73735870 Tan10g1658 Tan-Chr10:34729835 8.30E-35 dispersed
Tan07g2229 Tan-Chr7:73735870 Tan07g2230 Tan-Chr7:73746238 3.10E-37 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28047 PF03195 LOB 1.20E-35 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2229 K13945 - csv:101214764 400.593