Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g2229 | ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGATGTGTTTTTGCTCCTTATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAGGTCTTTGGAGCTAGCAATGTCTCTAAGCTTCTTGCTCGTCTCCCTCTTACTGAGCGCTGTGAGGCTGCTGTTACCATTTCTTATGAAGCTCAAGCTCGCCTTCAAGATCCTATCTATGGCTGCGTTTCTCATATCTTTGCCCTTCAACAGCAGGTTGTGAGTCTTCAGGCACAACTTGCTTCTCTCAAGGAACAAGCAGCTGAAAGCATTAATATTATGAACAGCTCTGGCAATGGAGGCGTGGTGAATGAGAAGAATTGCAGAAAGGCTCCTTCTCATTTCCAAGATCTCCATAACTGGTTTCAATCGGAGCATCCGACCGAGTTCAATCCGAACCCAACTCAGAATTCAGCATCAAACCCTTATTATGATGAGAATTATAGGATTATGGTTAATAATAATTCTCAGTCCAATGGGAACTATGAACATCAAATGGCTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACTTCAGGCTATTCCATGTATACTCTTGATCACCTCCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTGCAATCAGTTGCTTTTGGCAATAGTACTCGACATTGGTGA | 726 | 42.01 | MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESINIMNSSGNGGVVNEKNCRKAPSHFQDLHNWFQSEHPTEFNPNPTQNSASNPYYDENYRIMVNNNSQSNGNYEHQMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNSTRHW | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 73735870 | 73737059 | + | Tan0015623.1 | Tan07g2229 | 759760 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g2229 | 241 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Tan07g2229 | 241 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 105 | IPR004883 | - | |
Tan07g2229 | 241 | Coils | Coil | 87 | 114 | - | - | |
Tan07g2229 | 241 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 232 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1134 | Tan-Chr6:11283057 | Tan07g2229 | Tan-Chr7:73735870 | 5.40E-42 | dispersed | |
Tan07g2229 | Tan-Chr7:73735870 | Tan10g1658 | Tan-Chr10:34729835 | 8.30E-35 | dispersed | |
Tan07g2229 | Tan-Chr7:73735870 | Tan07g2230 | Tan-Chr7:73746238 | 3.10E-37 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28047 | PF03195 | LOB | 1.20E-35 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g2229 | K13945 | - | csv:101214764 | 400.593 |